Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi03g0733 ATGAGTCCCCCTGCCGCACGACGGCCAGCCACGCGATTTCTCTTCACCCCAAACAGTTTCTCTCTGCCTCATCTGAGATCGGAGCAACGACGGCGCTGGGCGATCAGCGACGTCGCGCTCTACGAGGCAGATCTACGCGAAGGCCTAAGAGAAATGGCTCAAATGGTTTGTGGTTCTTGTGGTCGCTTGCTTTCATATCCTCAAGGTGCCAAACATGTCAAATGTTCTTGCTGTCACATTGTCAACCTTGTATTAGAAGTTCATCAGGTTGGGCAAGTTAAGTGTGGGAGCTGTGCTTTACTGCTAATGTACCCATATGGTGCTACACAAATTAGGTGTTCGTCCTGCCAATTTGTGACAGAAATTGGGGAACACAACAGGCGGCCTCCATTGTCTGTACAGCAAGGGAAAACTTCTCCTAAAACTTTTAGTTAG 435 0.492 MSPPAARRPATRFLFTPNSFSLPHLRSEQRRRWAISDVALYEADLREGLREMAQMVCGSCGRLLSYPQGAKHVKCSCCHIVNLVLEVHQVGQVKCGSCALLLMYPYGATQIRCSSCQFVTEIGEHNRRPPLSVQQGKTSPKTFS 144
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi03g0733 144 PANTHER PROTEIN LSD1 49 139 IPR040319 -
Glsi03g0733 144 NCBIfam zinc finger domain, LSD1 subclass 92 120 IPR005735 -
Glsi03g0733 144 NCBIfam zinc finger domain, LSD1 subclass 54 84 IPR005735 -
Glsi03g0733 144 Pfam LSD1 zinc finger 95 119 IPR005735 -
Glsi03g0733 144 Pfam LSD1 zinc finger 57 81 IPR005735 -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-LSD Glsi03g0733 zf-LSD1 1.7e-10 No_clan