Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi03g0724 ATGGCCTTACAGAACATTGGTGCTTCAAATCGTGATGATGCCTTCTATAGGTACAAGATGCCAAAAATGATAACCAAGATTGAAGGTAGAGGAAATGGCATCAGGACTAATGCTGTTAGCATGGTTAACATTGCAAAGACCCTTGCTAGACCTACAGTTTACACTACAAAGTATTTTGGTTGTGAGCTTGGAGCCCACTCAAAATTTGATAGAGGGTTACAAATGTTTTTGTTGCATGCTTTAGAATCTTTTTGTGGGAAAGCAAGTAGAGAGGCAATGAAGGAGGTTGCATTAATCTTGAAGGAGCTTTATGATTGTGATGTGTTGGTGGAGGAGTCTATACTTCAATGGTATGGTATTGGCAAGGCTCGGTTAGCAGCAATAAGAGTTCACAAATCTGGAAGGATGTCAAACCCTTCATTGAATGGCTTGAAAATGTTGAGTCTGAATCTGAGGAAAAATAAACAGACTATTACTTTTCTGTCATGTTCTGTTTGCCATATTTGCTAA 510 0.3882 MALQNIGASNRDDAFYRYKMPKMITKIEGRGNGIRTNAVSMVNIAKTLARPTVYTTKYFGCELGAHSKFDRGLQMFLLHALESFCGKASREAMKEVALILKELYDCDVLVEESILQWYGIGKARLAAIRVHKSGRMSNPSLNGLKMLSLNLRKNKQTITFLSCSVCHIC 169
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi03g0724 169 SMART 542_3 61 138 IPR003307 GO:0005515
Glsi03g0724 169 Pfam eIF4-gamma/eIF5/eIF2-epsilon 74 122 IPR003307 GO:0005515
Glsi03g0724 169 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 71 IPR045196 GO:0003743|GO:0006413
Glsi03g0724 169 SUPERFAMILY Translation initiation factor 2 beta, aIF2beta, N-terminal domain 10 73 IPR016189 GO:0003743|GO:0006413
Glsi03g0724 169 SMART eIF2Bneu4 15 109 IPR002735 GO:0003743|GO:0006413
Glsi03g0724 169 SUPERFAMILY ARM repeat 69 117 IPR016024 -
Glsi03g0724 169 Gene3D - 2 83 - -
Glsi03g0724 169 ProSiteProfiles W2 domain profile. 1 169 IPR003307 GO:0005515
Glsi03g0724 169 Pfam Domain found in IF2B/IF5 11 77 IPR002735 GO:0003743|GO:0006413
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi03g0724 Glsi-ChrGlsi03 23494312 23494821 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi03g0724 1 71 Eukaryotic Initiation Factors Gene Family AT1G36730 83.099 1.50e-38 134