Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi03g0720 ATGGAGCCGGAAGATGGTAGTGGAGGAGGAGGTAGTGGTGGTGATGAAGGCGGAGGAGGAGACATAAATAAGCAACCTCAACAACGGAGACTGATGACGATGCAAGTACATGAGCAACCTCATGCTCCACATCCGCAGCAGCAGACCCAGAGATGCCCACGCTGCGAGTCTCTGAACACCAAGTTCTGCTATTACAACAATTATAGCCTGTCACAACCTCGGTACTTCTGCAAAACATGTAGAAGGTACTGGACCCAAGGCGGAACCTTGAGGAACGTACCCGTTGGAGGTGGTTGCCGTAAGGGAAAGAGCGCCAAAACGTCTTCATCTTCCGTCGAGAATTGCCGGTCAAGGCTGCAATCCCCACCGCAAGAGGTGGTCCATACGCAGCCAAATTCGACGACGGTGATAAGGGCTAAAGACCCTTCAGCCGCAGGTTCTCCTTCTCCGGCGGTCCCTTCAATCAGTCCCTATTATCAAGGTGGTGGGTATTTGTCTTCTCTGGCAGCGATTCAGTCACTGAACCCATCACAGCCTTTCAATCAGTCTCTGAATGGCGGGGGTGATGCTCTGGGTTCATCCAATTTGGCTCTTCTTTCCGGGTTCACTGCTGCTTCTCTTGGCTCACAACCCCTTCACCAACTGCAGTGCCAAATTCGTCCATCGCAAATTTATCAAATGAGTGACAGAGAGAGGGAACTAGAATCTCTATATCCAGCGGAACAAGGTTTGGTTCAGTCGAGCATCGATAATAGCAGTCCTGCTTCTCGCCATGATTGGCCTCAAAGCTTCATCAATAATGCTAACCATAGGGCCTCTGATGCCTCTTTGTGGAGTACTATCAGCACCACTTCCATTGGCGATATTTCTGAGAGTAATAATGCTAGTGCTGGATCTTCTTATTTGATCCCAAATCAATGGCCTGACCTGCGAGGACCATGA 942 0.5011 MEPEDGSGGGGSGGDEGGGGDINKQPQQRRLMTMQVHEQPHAPHPQQQTQRCPRCESLNTKFCYYNNYSLSQPRYFCKTCRRYWTQGGTLRNVPVGGGCRKGKSAKTSSSSVENCRSRLQSPPQEVVHTQPNSTTVIRAKDPSAAGSPSPAVPSISPYYQGGGYLSSLAAIQSLNPSQPFNQSLNGGGDALGSSNLALLSGFTAASLGSQPLHQLQCQIRPSQIYQMSDRERELESLYPAEQGLVQSSIDNSSPASRHDWPQSFINNANHRASDASLWSTISTTSIGDISESNNASAGSSYLIPNQWPDLRGP 313
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi03g0720 313 MobiDBLite consensus disorder prediction 1 31 - -
Glsi03g0720 313 ProSitePatterns Zinc finger Dof-type signature. 52 88 IPR003851 GO:0003677|GO:0006355
Glsi03g0720 313 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 37 225 IPR045174 GO:0003700|GO:0006355
Glsi03g0720 313 MobiDBLite consensus disorder prediction 97 131 - -
Glsi03g0720 313 ProSiteProfiles Zinc finger Dof-type profile. 50 104 IPR003851 GO:0003677|GO:0006355
Glsi03g0720 313 MobiDBLite consensus disorder prediction 103 131 - -
Glsi03g0720 313 Pfam Dof domain, zinc finger 48 104 IPR003851 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi03g0720 Glsi-ChrGlsi03 22564839 22565780 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi03g0720 52 221 C2C2-Dof Transcription Factor Family AT4G21050 41.176 6.69e-34 122
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Glsi03g0720 zf-Dof 1.8e-32 No_clan