Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi03g0712 ATGGCTATCCATAGTAATCAACATGCAGCTTCTGAAGGTATTCTTGAGAATGTGTGGGCTAAAATTATCAGCAGTGATGGAGCAAATGCACCAGAATCTTCCAAGTCCTGGGAAGGGCTTCCCAATCTTGATGGAAGAGATGGATCTATGGAAATTCTACAAAGGCTTCCAAGTTTAGGGAGATGGATATCAATGGGAGCCGAAGCCTGGGAAGAAATTTTAGATGGTTTTCAACCTGCTACTGTGAGCAAAACACAAGACTCTAGCAATAACAATTTGGAAACTGCAGGACTAGCCACAGAATCCAAAGAAGATACTGAGAGAGCGGAGAAGGTAGCTGCAAAACAGTACAGGGGAGTGAGGAGAAGGCCATGGGGAAAATATGCTGCAGAAATTAGAGATTCATCAAGGAAAGGTGCTAGAGTTTGGCTTGGGACATTTGACACAGCTGAGGAAGCAGCTTTAGCTTATGACAAAGCTGCTTTGAGAATTAGAGGTCCTAAGGCATACCTAAATTTTCCACTTGAGACAGTTGCAAATGCTTTAGGATTTGACCACAAAGGAACGGATCCTACAACCTGCGCTTCTTCAGTTTGTCAAGAGGATAATTACCCTTCTTGCAGATTTATTGGGGTCAACGAAAATTGCTGCAATTCCAGGAAAAGAAAATTGAGGCGGGGGGAAGAACATGCTGATATGATGAATGAGCAACCTGCAGCTAAAAAGATGGCGAACTCGGAACGTATGCTGGGGAATGACTATGATCTCGATGTTTTCGTGTTTCAGGACTTGGGGAGTGATTATTTGGACACTTTGCTATCTTCTTTTTGA 831 0.4308 MAIHSNQHAASEGILENVWAKIISSDGANAPESSKSWEGLPNLDGRDGSMEILQRLPSLGRWISMGAEAWEEILDGFQPATVSKTQDSSNNNLETAGLATESKEDTERAEKVAAKQYRGVRRRPWGKYAAEIRDSSRKGARVWLGTFDTAEEAALAYDKAALRIRGPKAYLNFPLETVANALGFDHKGTDPTTCASSVCQEDNYPSCRFIGVNENCCNSRKRKLRRGEEHADMMNEQPAAKKMANSERMLGNDYDLDVFVFQDLGSDYLDTLLSSF 276
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi03g0712 276 FunFam Ethylene-responsive transcription factor 2 115 176 - -
Glsi03g0712 276 ProSiteProfiles AP2/ERF domain profile. 116 174 IPR001471 GO:0003700|GO:0006355
Glsi03g0712 276 MobiDBLite consensus disorder prediction 82 99 - -
Glsi03g0712 276 Gene3D AP2/ERF domain 115 176 IPR036955 GO:0003700|GO:0006355
Glsi03g0712 276 SUPERFAMILY DNA-binding domain 116 176 IPR016177 GO:0003677
Glsi03g0712 276 PRINTS Ethylene responsive element binding protein signature 117 128 IPR001471 GO:0003700|GO:0006355
Glsi03g0712 276 PRINTS Ethylene responsive element binding protein signature 140 156 IPR001471 GO:0003700|GO:0006355
Glsi03g0712 276 CDD AP2 115 174 IPR001471 GO:0003700|GO:0006355
Glsi03g0712 276 MobiDBLite consensus disorder prediction 82 108 - -
Glsi03g0712 276 Pfam AP2 domain 116 166 IPR001471 GO:0003700|GO:0006355
Glsi03g0712 276 PANTHER DNA-BINDING DOMAIN 90 235 IPR044808 GO:0003700|GO:0009873
Glsi03g0712 276 SMART rav1_2 116 180 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi03g0712 Glsi-ChrGlsi03 20725571 20726401 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi03g0712 14 276 AP2-EREBP Transcription Factor Family AT4G18450 38.387 1.57e-49 164
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Glsi03g0712 AP2 3.9e-16 CL0081