Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi03g0704 ATGTCTGTTTCCTCCTCTTCTTCTTCTTCTTCTTCTTCTTCTGCTCCTGCTGCTGCTTCTTCGTTTCTATTCACTTCTTTCTTTGTTTTCTCCATTTTGACACAATTTTCATTCTGCTTAGCCAAACTTGCCAACACTACTCGCCCCCATCGCCAGCTCTCTGTGGATTATTATGCCAAATCTTGCCCCCAGCTAGAGCAGCTCGTTGGCTCAGTCACCTCTCAACAGTTCAAGGAATCACCAATTTCAGGGCCTGCCACCATTCGCCTCCTCTTCCATGATTGCTTTGTAGAGGGTTGTGATGCTTCAGTTTTAATAGCATCAAAGCCTGGAAGCAGAGAGTTAGCAGAGAAGGATGCAGTGGAAAACAGAGATTTGAAGGTGGAAGGTTTTGAGACAATAAGAAAGGCTAAGGCACTAGTGGAGAGCAAATGCCCAGGTGTAGTGTCCTGTGCGGACATTCTTGCAATTGCAGCCAGAGATTATGTACACCTCGCAGGGGGCCCCAATTACCAAGTGAAGAAGGGTAGATGGGATGGTAAAATATCAATGGCATCGAGAGTTGGGTCCAATATCCCTCATCCAAACTCCACCGTTGATCAGATAATCAAACTTTTCACCTCAAAAGGGTTAACCATGCAAGACATGGTTGTTCTTTCGGGTGCCCACACAATCGGGTTCGCCCATTGCAAGCACTTTGTGACCCGACTGTACAATTATCGGGGCAAGGGTCAGCCGGACCCCGACATGGACCCGAAACTCATGTATGCGCTGAGAATGTATTGTCCAAGTTATGGTGGTAATTCAGGCACCGTTGTCCCATTTGATGCCACCACGCCATTCTTGTTTGATCATGCCTATTACGGGAACTTGCAAAACAAGAGGGGTTTGCTAGCCTCCGACCAGGCTCTGTTTTTGGACCCAAGAACCAAGCCTCTGGTTCTGGATTTGGCAAAAGATAAGCTAAAGTTTTTTCAAGCTTTTGCAGCTGCCATGGAGAGATTGAGTCTGGTAAAAGTGAAGAGAGGGAGAAAGCATGGAGAGAAAAGGAGAGATTGTAGTATGCACATGTGA 1074 0.4665 MSVSSSSSSSSSSSAPAAASSFLFTSFFVFSILTQFSFCLAKLANTTRPHRQLSVDYYAKSCPQLEQLVGSVTSQQFKESPISGPATIRLLFHDCFVEGCDASVLIASKPGSRELAEKDAVENRDLKVEGFETIRKAKALVESKCPGVVSCADILAIAARDYVHLAGGPNYQVKKGRWDGKISMASRVGSNIPHPNSTVDQIIKLFTSKGLTMQDMVVLSGAHTIGFAHCKHFVTRLYNYRGKGQPDPDMDPKLMYALRMYCPSYGGNSGTVVPFDATTPFLFDHAYYGNLQNKRGLLASDQALFLDPRTKPLVLDLAKDKLKFFQAFAAAMERLSLVKVKRGRKHGEKRRDCSMHM 357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi03g0704 357 Gene3D Peroxidase, domain 2 193 335 - -
Glsi03g0704 357 ProSiteProfiles Plant heme peroxidase family profile. 52 357 IPR002016 GO:0004601|GO:0006979|GO:0020037
Glsi03g0704 357 Pfam Peroxidase 72 319 IPR002016 GO:0004601|GO:0006979|GO:0020037
Glsi03g0704 357 FunFam Peroxidase 56 202 - -
Glsi03g0704 357 PRINTS Plant peroxidase signature 290 307 IPR000823 GO:0004601|GO:0006979|GO:0020037
Glsi03g0704 357 PRINTS Plant peroxidase signature 62 81 IPR000823 GO:0004601|GO:0006979|GO:0020037
Glsi03g0704 357 PRINTS Plant peroxidase signature 274 289 IPR000823 GO:0004601|GO:0006979|GO:0020037
Glsi03g0704 357 PRINTS Plant peroxidase signature 330 343 IPR000823 GO:0004601|GO:0006979|GO:0020037
Glsi03g0704 357 PRINTS Plant peroxidase signature 214 226 IPR000823 GO:0004601|GO:0006979|GO:0020037
Glsi03g0704 357 PRINTS Plant peroxidase signature 86 106 IPR000823 GO:0004601|GO:0006979|GO:0020037
Glsi03g0704 357 PRINTS Plant peroxidase signature 129 142 IPR000823 GO:0004601|GO:0006979|GO:0020037
Glsi03g0704 357 PRINTS Plant peroxidase signature 148 158 IPR000823 GO:0004601|GO:0006979|GO:0020037
Glsi03g0704 357 PRINTS Plant peroxidase signature 167 182 IPR000823 GO:0004601|GO:0006979|GO:0020037
Glsi03g0704 357 PANTHER - 40 355 IPR000823 GO:0004601|GO:0006979|GO:0020037
Glsi03g0704 357 CDD secretory_peroxidase 52 354 IPR033905 GO:0004601|GO:0042744
Glsi03g0704 357 FunFam Peroxidase 193 335 - -
Glsi03g0704 357 SUPERFAMILY Heme-dependent peroxidases 52 355 IPR010255 GO:0004601|GO:0006979|GO:0020037
Glsi03g0704 357 ProSitePatterns Peroxidases proximal heme-ligand signature. 215 225 IPR019793 -
Glsi03g0704 357 ProSitePatterns Peroxidases active site signature. 84 95 IPR019794 GO:0004601
Glsi03g0704 357 Gene3D - 56 355 - -
Glsi03g0704 357 PRINTS Haem peroxidase superfamily signature 84 98 IPR002016 GO:0004601|GO:0006979|GO:0020037
Glsi03g0704 357 PRINTS Haem peroxidase superfamily signature 149 166 IPR002016 GO:0004601|GO:0006979|GO:0020037
Glsi03g0704 357 PRINTS Haem peroxidase superfamily signature 167 179 IPR002016 GO:0004601|GO:0006979|GO:0020037
Glsi03g0704 357 PRINTS Haem peroxidase superfamily signature 215 230 IPR002016 GO:0004601|GO:0006979|GO:0020037
Glsi03g0704 357 PRINTS Haem peroxidase superfamily signature 276 291 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi03g0704 Glsi-ChrGlsi03 20160356 20165874 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi03g0704 21 357 Peroxidase AT2G34060 61.808 1.01e-160 452