Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi03g0699 ATGGAGACCGAATCTCGCCATTATCAGAATATATATATGAAGGCTCGAGAGTATTTTCTTTTAAAAACTGTAGGAATAAGTGATATTTCTGCTCATCTTCCCCATAATACTACGTTCAATATGAATACAGTGCCAAACCTTTTGCTTCTTTTTCCTGTGTTCATCTCCCTTCTCCTATTCAAGTGCTTTATAGGAGCTGTAGCTGCCAACGGTTATGAAAGTACTGATGTTGGTGCAATTATTGATGTCAGTTCTCAAATAGGAAAACAACAGAGAAAAGCCATGGAAATTGCAACTCAAAACTTCAATCGCCATTCAAAGACTCACAAACTATCCCTCCATTTTCGTGACTCTGGTAGTAACCCATTACAAGCAGCTTCGGCTGCAAAGGAGCTTATAGATGAGAAGAAAGTAAAAGTCATTATTGGCATGGAGACATGGCAGGAAGCAGCTCTTGTAGCTGACCTTGGAGATAAAGCTAAAGTTCCCGTTATTTCATTCTCAGGTCCCTCAATAACCTCACCATCATCATCAATTCCACTTCGTTGGCCTTTCTTGATTCAAATGGCTAAGAATCAGACAGCAAATATGAACTGCATAGCAGATATTGTTCAAACATACAATTGGCAAAAGGTTATAGCAATATATGAAGACGACCCTTATAGTGGTGATTCTGGCATGTTAACCCTTCTTTCTGAAGCTCTCGTGAAGATTAATTCCCAGATTGAGCATAGACTAGTTCTTCCACCACTTTCTTCTTTGTCTGATCCAAAAGGCGTAGTTCTTGATGAATTGCTTAAGCTATTATCAGCACAATCTCGGGTTTTTATTGTTCTTAAAGCTTCATTGCCGATGGTAATCCATTTGTTCAGAGAAGCTACGAAAGTGGGGTTTTTAGGGAAAGAATCAGCTTGGATAATCAATGAGGGTATTACAAACATGCTGGACTCTGTTAATGATTCAGTTTTATCCTCCATGGAAGGTAGTTTGGGAATAAAAACCTACTATTCTACAAGTTCTAGTGCTTATACTCAGTTTCAGAAGAAGTTCAAAATTGAGCATGCAGAGAAAGTTGAGTCTAAACCAGGAGCAAATGCGCTACAAGCTTATGATAGCATCACAATCATCACAAAGGCCTTAGAAAAAATGAATTCTAATACTAGTAACTCAAGGGTGTTCCTAGAGAAAATGCTGGCCAGCAATTTCTCCGGTTTAAGTGGGAAAATTATATTAGAAGAAGGCCATTTATCCTACACTCCAATGTTAAGAGTCATAAACGTGGTTGGGAAGAAATACACAGAATTGAGCTATTGGATCCCAAATTTGAAGTTCTTTATATCTCTAAAGGACTCGGAGAAAATAGGTGGTTCTGCTACAATAACTGGTCCTGTGGTTTGGCCTGGAGGCCTAAAGTCAGCTAATCCGAAAGGATGGAGAATACTTACTCTTTTAAAAGTAGCTGTTCCTATAAATCCAGCTTTTGATAATTTTGTTAGGGAAGAATCTCCAGATCAATATACTGGCCTGTGTATTGAAATTTTTAAAAAGGTGCAATTATTCCTTAAAGACAGGTACTCTGGTCTGCCATACAAATTCTTTCCTTTCAATATATCCTACGATGAGCTTCTACAAAATGTTGTGAACCAGTCCTACGATGCTATTGTTGGAGATGTAACAATACTTGCTGAAAGATCAAAGGATGTGTCCTTCACTCAGCCATACACCGAGTCAGGTTTATCACTCATACTTCCAGCGGAGAAAGAAGGGACAACATGGTTGTTTATGAAACCATTTAGCTGGGAAATGTGGTTGGCGACTTGCGGCATCCTCATCTACACAATGCTTATTATCTGGTTCTTGGAGCATCCATTAAACCCCGAATTTAAAGGACCATGGAAGCATCAATTCAGCACCACACTTTGGTTCGCTTTTTCTTCTCTATTTTTTGCTCACAGGGAGAAAGTCTACAGCAACTCTGCAAGAGTAGTAGTTGGTGGATGGTTATTCCTAGTGTTTGTTCTAACCTCAAGCTACACTGCCAGTCTATCTTCTATGCTCACTGTCAAAAGGATGAAGTCTGGGAGAGATATAGAGTGGCTAAAGAAAAATAATTTACCAGTTGGTTGTGATAATAGCAGTCAATTTGTCAAGAACTACATGCTGAAAGTGTACAATATCCGAGAAAAACAGATTGTAGAACTTCAGGGTGAATATGACCATGTGGAGAAATTTAAGAGCAAACAAATTTCTGCTCTGTTTCTTGAGAGCCCATATGAGAAGGTTTTCTTGAATAAGTACTGTAATGATTACATTGCAACCTCAGCTGGCTATAAATTTGGAGGCCTAGGCTTTGTATTCCAGAAAGGCTCTCCCATGGTGAGAGACTTTTCTGAAGGTATTTTAACACTAGCAGAAAATGGAACACTACGAACTTTGGAAGAGTACTGGTTAACCCCTTCAAATCAATGCTCAGATAACACAACGTCTGCTGAAACGGAGAGCCTGACCATTGGTGACTTTTGGGTTCTCTATGTTATCTCTGGTGCCACTTCCACCATCTGCCTTTTGCTGACTTTATTGAAAATTTACAACCGTAACCGTTACCATCATCAAGTGGCAGATCAAGGCAATGAAACTGCTGCTGATAATAGTGTTTGGAAGAAGGTGGGAGAGTATAAGCAGTTCTGA 2688 0.3925 METESRHYQNIYMKAREYFLLKTVGISDISAHLPHNTTFNMNTVPNLLLLFPVFISLLLFKCFIGAVAANGYESTDVGAIIDVSSQIGKQQRKAMEIATQNFNRHSKTHKLSLHFRDSGSNPLQAASAAKELIDEKKVKVIIGMETWQEAALVADLGDKAKVPVISFSGPSITSPSSSIPLRWPFLIQMAKNQTANMNCIADIVQTYNWQKVIAIYEDDPYSGDSGMLTLLSEALVKINSQIEHRLVLPPLSSLSDPKGVVLDELLKLLSAQSRVFIVLKASLPMVIHLFREATKVGFLGKESAWIINEGITNMLDSVNDSVLSSMEGSLGIKTYYSTSSSAYTQFQKKFKIEHAEKVESKPGANALQAYDSITIITKALEKMNSNTSNSRVFLEKMLASNFSGLSGKIILEEGHLSYTPMLRVINVVGKKYTELSYWIPNLKFFISLKDSEKIGGSATITGPVVWPGGLKSANPKGWRILTLLKVAVPINPAFDNFVREESPDQYTGLCIEIFKKVQLFLKDRYSGLPYKFFPFNISYDELLQNVVNQSYDAIVGDVTILAERSKDVSFTQPYTESGLSLILPAEKEGTTWLFMKPFSWEMWLATCGILIYTMLIIWFLEHPLNPEFKGPWKHQFSTTLWFAFSSLFFAHREKVYSNSARVVVGGWLFLVFVLTSSYTASLSSMLTVKRMKSGRDIEWLKKNNLPVGCDNSSQFVKNYMLKVYNIREKQIVELQGEYDHVEKFKSKQISALFLESPYEKVFLNKYCNDYIATSAGYKFGGLGFVFQKGSPMVRDFSEGILTLAENGTLRTLEEYWLTPSNQCSDNTTSAETESLTIGDFWVLYVISGATSTICLLLTLLKIYNRNRYHHQVADQGNETAADNSVWKKVGEYKQF 895
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi03g0699 895 Pfam Receptor family ligand binding region 92 427 IPR001828 -
Glsi03g0699 895 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 76 865 IPR015683 -
Glsi03g0699 895 PIRSF IGluLR_plant 44 894 IPR017103 -
Glsi03g0699 895 Gene3D - 759 825 - -
Glsi03g0699 895 FunFam Glutamate receptor 591 721 - -
Glsi03g0699 895 Gene3D - 592 730 - -
Glsi03g0699 895 Gene3D - 78 419 - -
Glsi03g0699 895 Pfam Bacterial extracellular solute-binding proteins, family 3 496 818 IPR001638 -
Glsi03g0699 895 Pfam Ligand-gated ion channel 819 848 IPR001320 GO:0015276|GO:0016020
Glsi03g0699 895 SMART GluR_14 483 819 IPR001320 GO:0015276|GO:0016020
Glsi03g0699 895 FunFam Glutamate receptor 196 362 - -
Glsi03g0699 895 Gene3D - 482 591 - -
Glsi03g0699 895 SUPERFAMILY Periplasmic binding protein-like I 77 477 IPR028082 -
Glsi03g0699 895 CDD PBP1_GABAb_receptor_plant 76 448 IPR044440 -
Glsi03g0699 895 Gene3D - 192 438 - -
Glsi03g0699 895 SUPERFAMILY Periplasmic binding protein-like II 483 818 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi03g0699 Glsi-ChrGlsi03 19783082 19790905 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi03g0699 57 857 Ion Channels AT2G29120 33.801 2.80e-134 424