Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi03g0685 ATGATAACCAAGATTGAAGGTAGAGGAAATGGCATTAGGACGAATGTTGTTAACATGGTTGACATTCCAAAGACCCTAGCTAGACCTGCAGTTTACATTACAAAGATTTTGGTTGTGAGCTTGGAGCCCAATCAAAATTTGATGAAGGGTCACAAATGAGGAGTCTATACTTCAATGGTATGGTATCGGCAAGGCTCAGTTGGCAATAACAAGAGCTCACAAATCTGGAAGAACGTCAAACCCTTCGTTGAATGGCTTGAAAATGCTGAGTCTGAATCCGAGGAAGAATAA 291 0.4089 MITKIEGRGNGIRTNVVNMVDIPKTLARPAVYITKILVVSLEPNQNLMKGHKXGVYTSMVWYRQGSVGNNKSSQIWKNVKPFVEWLENAESESEEE 96
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi03g0685 96 ProSiteProfiles W2 domain profile. 1 96 IPR003307 GO:0005515
Glsi03g0685 96 SUPERFAMILY ARM repeat 61 90 IPR016024 -
Glsi03g0685 96 Pfam eIF4-gamma/eIF5/eIF2-epsilon 61 96 IPR003307 GO:0005515
Glsi03g0685 96 Gene3D - 1 84 - -
Glsi03g0685 96 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 1 44 IPR045196 GO:0003743|GO:0006413
Glsi03g0685 96 SUPERFAMILY Translation initiation factor 2 beta, aIF2beta, N-terminal domain 6 47 IPR016189 GO:0003743|GO:0006413
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi03g0685 Glsi-ChrGlsi03 18877585 18877981 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi03g0685 1 41 Eukaryotic Initiation Factors Gene Family AT1G36730 68.293 2.73e-13 62.0