Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi03g0670 ATGCCTACTTCTTCTTCTTCTACTTCTGTTTGGGCGTTATCTCACATAAAGCTTCAATTCTTTGCCCATATCAGACGTTTTCTCCAATCCAAAGCTTCAAGAAAACGCCGCGACCCCTCTGATCAATTTGGCGTATCAAAAACCAAAGCTGAACACAACAAGAAGATTGAAATAGCACCAGTTATGCAGAAGCAGAGTGAGAGTAGTGAGGAGGAGTCTGCAATTTTGCTGCAGAGGTCTGTGAAGAAGCTTCACTTTGGTAACTGGGAAGAGAAGGAGGTGGCAGCAAAAGAGATTGAAATTGTAACTAAAGAAGATGCCAAGGCTCGAAATTTGATAACAGAGCTTGGGGTGGTACCGGTGCTGGTATCTATGGCGGCGTCTGTGGTGGTAACCCGGCGGCGATCAGGAGTGAAGGCGTTGATCCAACTCGCTAATGGAAGTTTCATGAAAAAAGTTTTGATAGTGGAGGCTGGAATATTGTCCAAGCTGCCAAAGAGGATTGACCTTGTAGATGAATCAACAAGAAGTGAATTTGCAGAGTTGATTTTGTTGTTGTCATCTCTGGCAAACACCCAATTCCCTTTTGCTTCATTAGACTTTCTCCCATTTCTCAGAGACATTCTTGAGTCACGCTCAAGTTTTGACACCAAACTGTCATGTTTGGGTGCCTTATACAATTTCTCAACTTTGTTAGAGAATGTAGAGCCTTTGGTTTCTAGTGGGATTGTGCTTGTCCTTTTGGAATTGTCCTCAGTGAAAGAACTTTCAGAGAAAGCACTTGCCACTGTAGGGAACTTGGTGGTGACTTCGACGGGAAAGAAAGCAGTAGAAAATAGCTCAACGGTACCAGAGGGCTTGATAGAGATTTTGTCATGGGAAGATAAACCAAAATGCCAGGAGTTGTCAGCTTATGTTTTGATGATTCTAGCTCATCAAAGCTCATCACAGAGAGAAAAAATGGTACAGGCAGGGATTGTTCCTGTGCTTCTTGAGGTAGCTCTATTGGGGAGCACTTTAGCTCAGAAGAGAGCACTGAAATTATTGCAATGGTTTAAGGATGAAAGGCAAGCAAAGATGGGGCCTCATTCAGGTCCACAAATGCCAGGAATAGCAATGGGTTCACCTGTGAATCAAAGGGAGGGAAAAGAAGGAAAGAGAATGATGAAGAATTTGGTTAAACAAAGTTTGCTTAGGAATATGGAAACCATAACTCAGAGAGCAAATGCAGCTGGTGAATCTTCAAAGCTAAAGTCTTTGTTTATCAGTTCAAGTTCCAAGAGTTTGCCCTACTAA 1296 0.4267 MPTSSSSTSVWALSHIKLQFFAHIRRFLQSKASRKRRDPSDQFGVSKTKAEHNKKIEIAPVMQKQSESSEEESAILLQRSVKKLHFGNWEEKEVAAKEIEIVTKEDAKARNLITELGVVPVLVSMAASVVVTRRRSGVKALIQLANGSFMKKVLIVEAGILSKLPKRIDLVDESTRSEFAELILLLSSLANTQFPFASLDFLPFLRDILESRSSFDTKLSCLGALYNFSTLLENVEPLVSSGIVLVLLELSSVKELSEKALATVGNLVVTSTGKKAVENSSTVPEGLIEILSWEDKPKCQELSAYVLMILAHQSSSQREKMVQAGIVPVLLEVALLGSTLAQKRALKLLQWFKDERQAKMGPHSGPQMPGIAMGSPVNQREGKEGKRMMKNLVKQSLLRNMETITQRANAAGESSKLKSLFISSSSKSLPY 431
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi03g0670 431 MobiDBLite consensus disorder prediction 359 379 - -
Glsi03g0670 431 PANTHER ARM REPEAT SUPERFAMILY PROTEIN 10 431 - -
Glsi03g0670 431 SUPERFAMILY ARM repeat 81 351 IPR016024 -
Glsi03g0670 431 Gene3D - 52 374 IPR011989 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi03g0670 Glsi-ChrGlsi03 17992504 17996034 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi03g0670 90 369 U-box Gene Family AT1G67530 31.010 3.69e-21 94.4