Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi03g0669 ATGTTGTACAATTTATTGGACTTGTACAAAGCCACCACATACAATGCTACCAATCTTTTGATGGATGAAAATAATGTTATCAAGGTTGTTGATTTTGGGGTTGCTAGAGTGAAAGTTCAATCTGGAGTTATGACTGTAGAGACTGAAATATATAGATGGATGGCTCCTGAAAATGAGGATAAACTACTCATGTATGTGATATGGGGAAAAGGATTGCTGCAACATCATATATATCCAGTTTCTCTTCCTTATTATGGTCTTTGTCCATGCACTTTTGATGTTTTGTCTTTTGGAGCCAAGGGCAATGGAATTTCTGATGATTCAAAGGCACTTCTAGCAACATGGAAAGTTGCCTGCAAAGTTGCTGGTGCTTTTGTCAAAATATCTTGTATGCCCCATCTTACTCTTCAGATAGATGGAACTCTATTGGCACCTCCTGAACCATCTTCGTGGCCAAATTCCAGTTTGTTTCAGTGGATAAATTTCAAATGGGTCCACAACTTCACTATCAAAGGCTCCGTGCACAGATGA 531 0.3879 MLYNLLDLYKATTYNATNLLMDENNVIKVVDFGVARVKVQSGVMTVETEIYRWMAPENEDKLLMYVIWGKGLLQHHIYPVSLPYYGLCPCTFDVLSFGAKGNGISDDSKALLATWKVACKVAGAFVKISCMPHLTLQIDGTLLAPPEPSSWPNSSLFQWINFKWVHNFTIKGSVHR 176
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi03g0669 176 Gene3D - 89 175 IPR012334 -
Glsi03g0669 176 SUPERFAMILY Protein kinase-like (PK-like) 16 87 IPR011009 -
Glsi03g0669 176 Gene3D Transferase(Phosphotransferase) domain 1 14 87 - -
Glsi03g0669 176 SUPERFAMILY Pectin lyase-like 76 173 IPR011050 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi03g0669 Glsi-ChrGlsi03 17976743 17977855 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi03g0669 79 173 Glycoside Hydrolase AT3G26610 47.273 6.09e-28 106
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Glsi03g0669 None None None