Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi03g0661 ATGGTTTACCACTCTTGTAACTGGAATTCTTCATCTGGGTCTGATATTTCGAGGCTGTTCAATACGGCTCGGCATCACCTTGGTAATTGTGATGGGGTTTCGCGTAGTGGGCTGGCATCATCGCATTCGTTGGTTCTGGATAGTGAGAAGGGAGAGCTATTGCAGTCCCATGCAAGCATAGGAAAGAATGGCGTGTCTGAGGCAAAAGCTTTAGCGTCTTTGAAGAGCCATAGCGAAGCAGAGAGAAGAAGGGAGAGAATAAATGGTCATCTTGCTACACTTCGCGATCTTTTGCCCTGCGCTGAAAAGATGGATAAAGCCATGTTACTGGCTGAAGTTATTAGCCAAGTGAAAGAACTGAAGAAAAATGCAGTTGAAGCAAGCAAAGGCATTCTAATTCCAACGGATGCTGATGAAGTGAAAGTTGAACCATACAATGATGAAGGAGGAGAAGGATCAACATCTTACAGGGCATCTGTCTGCTGTGATTACCAACCTGAGCTTCTAACTGACCTAAGGCAGACTCTTGATGCCCTTAAACTGCAAATGGTGAGGACAGAAATATCAACTTTGGGAACCAGGGTGAAGAATGTATTTGTATTTACTTGCTGCAAAAGGGACAATATAAATAATGAAGAATGCCAACTCGTTGCAAGTACTGTTCACCAGGCACTAAGTTCCGTAGTCGATAAGGCTTCTAGCTCACTAGAATACTCGCTAAGGATGTCTTTTCCAGGCAAGAGGCGAAGACTCTGCTTCATTGAAACATCTACTTCCTCATGCAACCATGGATCTTGTTCATGTTGA 807 0.4387 MVYHSCNWNSSSGSDISRLFNTARHHLGNCDGVSRSGLASSHSLVLDSEKGELLQSHASIGKNGVSEAKALASLKSHSEAERRRERINGHLATLRDLLPCAEKMDKAMLLAEVISQVKELKKNAVEASKGILIPTDADEVKVEPYNDEGGEGSTSYRASVCCDYQPELLTDLRQTLDALKLQMVRTEISTLGTRVKNVFVFTCCKRDNINNEECQLVASTVHQALSSVVDKASSSLEYSLRMSFPGKRRRLCFIETSTSSCNHGSCSC 268
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi03g0661 268 Gene3D - 68 129 IPR036638 GO:0046983
Glsi03g0661 268 Pfam Helix-loop-helix DNA-binding domain 76 120 IPR011598 GO:0046983
Glsi03g0661 268 CDD bHLH_AtAIG1_like 67 144 - -
Glsi03g0661 268 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 71 120 IPR011598 GO:0046983
Glsi03g0661 268 PANTHER TRANSCRIPTION FACTOR BHLH30 34 255 IPR045847 GO:0003700|GO:0006355
Glsi03g0661 268 CDD ACT_UUR-ACR-like 159 225 - -
Glsi03g0661 268 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 76 123 IPR036638 GO:0046983
Glsi03g0661 268 Coils Coil 169 189 - -
Glsi03g0661 268 SMART finulus 78 126 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi03g0661 Glsi-ChrGlsi03 17425018 17427806 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi03g0661 19 233 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G68810 39.574 5.92e-33 122
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Glsi03g0661 HLH 1.1e-06 No_clan