Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi03g0660 ATGTTTAATTTTTGTGCAGTTTTCTTTTATTCTGCGGGAAAATTTGTACTTGGATTTCCAATCGTAGTTGTGTTTTTAATATATAAATGGAGAAGGAGGCATTTATCTGGAGATAGCAATGTTGAGGATTTTCTCCGAAGTCACATTAATTTAACGCCCATCAAGTACTCTTATTCGGACATAAAAAAAATAACCAATGGTTTCAAGCACAAGTTAGGAGAAGGAGGCTATGGTTCTGTTTATAAAGGAAAGCTTCGAAGCAAACGTGATGTGGCTGTGAAGTTATTAGGCAAGTTCACTACTGATGGGCATGAGTTCATCAATGAAGTTGCCACTATTGGAACCATTCGTCATGTCAATGTGGTGCAACTCATAGGATTTTGTGTAGAAAGAAGAAAGCGAGCTCTTGTTTATGAGTTCATGTCTAACGGATCTCTTGATAAATACATTCTGTCAGATGAACAAGGAAAATCATCAATAAACTATAAGAAAATATATGACATTTCTCTTGCGGTGGCTCGTGGAATTGAATACTTACATCGAGGTTGTGACAAGCAAATCCTACACTTTGATATCAAACCTCACAACGTTCTTCTTGATGAGAGTTTCACTCCAAAGATCTCAGACTTTGGGTTGGCAAAGTTGTGTCCAGTAGATAATAGTGTTGTATCTCTAACTGTGGCAAGAGGAACACTTGGATACATGGCTCCTGAATTGTTGTACAAAAACATTGGAGGTGTCTCGCACAAAGCTGATGTTTTTAGTTTTGGGATGATGTTGATGGAAATGGCAGGAAGAAGAAAGAACTATAATGTTGTGGAGAATTCCTGGCAAACTTACTTTGCCAAATGGGTTCATGACCAATTTGAGGAAACAATACTTTTAAGCAATGCCACAGATGAGGAGAAGAAGATAGCGCAAAAAATGATTGCTATAGCTTTAACTTGTATAGAGATGAAACCTAGTGATCGGCCCCCAATGAGCACAGTAATAGAGATGCTTGAAGGAGATGTTGAGCCATCAGAGTTTCTGCCATCTGAACCTCTTCTGCCTACTCATAGAATGACAAAAAATGATAGTACCACATAA 1089 0.3792 MFNFCAVFFYSAGKFVLGFPIVVVFLIYKWRRRHLSGDSNVEDFLRSHINLTPIKYSYSDIKKITNGFKHKLGEGGYGSVYKGKLRSKRDVAVKLLGKFTTDGHEFINEVATIGTIRHVNVVQLIGFCVERRKRALVYEFMSNGSLDKYILSDEQGKSSINYKKIYDISLAVARGIEYLHRGCDKQILHFDIKPHNVLLDESFTPKISDFGLAKLCPVDNSVVSLTVARGTLGYMAPELLYKNIGGVSHKADVFSFGMMLMEMAGRRKNYNVVENSWQTYFAKWVHDQFEETILLSNATDEEKKIAQKMIAIALTCIEMKPSDRPPMSTVIEMLEGDVEPSEFLPSEPLLPTHRMTKNDSTT 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi03g0660 362 FunFam PR5-like receptor kinase 141 344 - -
Glsi03g0660 362 FunFam serine/threonine-protein kinase PBS1-like 36 140 - -
Glsi03g0660 362 SUPERFAMILY Protein kinase-like (PK-like) 44 335 IPR011009 -
Glsi03g0660 362 Pfam Protein kinase domain 69 331 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi03g0660 362 Gene3D Transferase(Phosphotransferase) domain 1 141 342 - -
Glsi03g0660 362 PANTHER RUST RESISTANCE KINASE LR10-RELATED 38 348 IPR045874 GO:0004672
Glsi03g0660 362 ProSitePatterns Protein kinases ATP-binding region signature. 72 94 IPR017441 GO:0005524
Glsi03g0660 362 ProSiteProfiles Protein kinase domain profile. 66 344 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi03g0660 362 ProSitePatterns Serine/Threonine protein kinases active-site signature. 187 199 IPR008271 GO:0004672|GO:0006468
Glsi03g0660 362 Gene3D Phosphorylase Kinase; domain 1 33 140 - -
Glsi03g0660 362 SMART serkin_6 66 334 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi03g0660 Glsi-ChrGlsi03 17206699 17207787 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi03g0660 55 360 Receptor kinase-like Gene Family AT5G38280 52.063 5.53e-108 329
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Glsi03g0660 Pkinase 1.5e-48 CL0016