Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi03g0657 ATGGCTCTTTTGTTCAGAAAGAGAATTTCTTTCTTATTCTTCTGCTTCTTAGCTATATTTGCAGAAGCTGGTTTCCTTGACCCATGCATTGAATCAAGTTGTGGTGCTGATGAACCAAGTATTCGATTCCCGTTCAGGCTAAAAGGAACACAACCAGAACATTGCGGCTATAATTCTGGGTTTGATCTATACTGTACTGAAACAAACCAGACAGTGCTCAAACTGCCATTATCTATTACTGTTTCGGTCAACAGCATAGACTATGAATCACAGGTCTTAACTGTGTCAGACCCTAAAGGATGCACTGCTAATTTCAATTTATCCGCATCTCCTTTTCTACTCGATGATCCCTTTGGTTCAGACGGATTTGCATTATTCAATTGCTCAGGGACGTCTCGCAAAAATGCGGACAGCAAGTACTTTACAATATGGGGGAATTTTTCTTGCCTCGATGTTGCTGGCTATGAAGTCATAGCCATACCATCTACACAGAGCATCATGGACAATCCTCTTTTGTCTTGCACCAGAATTCGTAGCTATGTATCCTTGCCAAATTCTTTTTACACAAATAGTGGCACTGTAAGTCTATATTGGCTCCAACCAGATTGCAGAAACTGCGAAGCACAAGGTGGCCAATGTAAATTGGAAGAAAACAAATACAAACGTGAACTTGAATGTATCCCCAAGGACCCCAACCCTCATAAAGGTTCATCGAAATGGAAAGTACTTGCAGGTGAAATCCTAGGTCCTTTTCTGCCCATATTTGTTGGATTTATTGTCTATTGTTTCTATGTAGCTGTCCACGAGAAGCAGAGTTTCAAAAAGATCAAGCAGTTTTTGGAGGACTACAAAGCACTTAAGCCTGCTAGATATTCGTATGCAGATATAAAGAGAATTACAAATCAGTTCAAGGATGAATTGGGACAGGGAGCTTATGGAAACGTCTTCAAAGGGAAGCTGTCCAATGAAATTCAGTGGCACCCAGCAAATCGCCCAACCATGAAAGCTGTGGTTCAAATGTTGGAAGGAGATGGAGAGAAGTTAGTTATGCCTCCTAATCCATTTGGCTCTACTCCTACGACTAAACGAGGGCTGGAATTGGATCAAGGTATCAGAGCCCAGAGTTTATCTGTCATCTCTGAAATAGAGGAAAGTTGA 1158 0.4128 MALLFRKRISFLFFCFLAIFAEAGFLDPCIESSCGADEPSIRFPFRLKGTQPEHCGYNSGFDLYCTETNQTVLKLPLSITVSVNSIDYESQVLTVSDPKGCTANFNLSASPFLLDDPFGSDGFALFNCSGTSRKNADSKYFTIWGNFSCLDVAGYEVIAIPSTQSIMDNPLLSCTRIRSYVSLPNSFYTNSGTVSLYWLQPDCRNCEAQGGQCKLEENKYKRELECIPKDPNPHKGSSKWKVLAGEILGPFLPIFVGFIVYCFYVAVHEKQSFKKIKQFLEDYKALKPARYSYADIKRITNQFKDELGQGAYGNVFKGKLSNEIQWHPANRPTMKAVVQMLEGDGEKLVMPPNPFGSTPTTKRGLELDQGIRAQSLSVISEIEES 385
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi03g0657 385 PANTHER RING/U-BOX SUPERFAMILY PROTEIN 10 272 IPR046948 -
Glsi03g0657 385 Pfam Wall-associated receptor kinase galacturonan-binding 29 97 IPR025287 GO:0030247
Glsi03g0657 385 Gene3D Phosphorylase Kinase; domain 1 283 347 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi03g0657 Glsi-ChrGlsi03 17050086 17052111 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi03g0657 28 260 C3H Transcription Factor Family AT2G25410 32.377 2.08e-22 95.9