Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi03g0646 ATGGCTTCCACCAAGGAACGTGAAAACTTCGTCTACATCGCGAAGCTCGCTGAACAAGCCGAGCGCTATGAAGAAATGGTGGATGCCATGAAGAAGGTAGCAAATCTCAATGTTGAATTGACAGTTGAAGAGCGAAACCTTCTTTCAGTCGGGTACAAGAATGTCGTGGGTTCTCGGAGGGCTTCGTGGAGGATTTTGTCCTCGATTGAGCAGAAGGAGGAAGCAAAAGGAAACGCTGTGAGCGTGAAGAGGATAAAGGAGTATAGGCAAAAGGTGGAATCAGAGTTGTGGAATATCTGCAACGATATTATTGAAGTTATTGATGAGCTTCTTATTCCCTCGTGCTCGGGTGGTGAATCCAGTGTGTTTTTCTACAAAATGAAAGGTGACTATTATCGGTATCTGGCTGAATTTAAGGCTGGTGATGAAAGAAAGGAGGCTGCTGCTCATTCGATGAAAGCATATCAGGAAGCTTCCACTACAGCAGAGGCTGAGTTATCTCCTACACATCCCATCAGGCTGGGTTTGGCTTTGAACTACTCCGTCTTTTATTATGAAATATTGAACTCTCCTGAAAGGGCCTGTTACCTCGCTAAGCAGGCCTTCGATGAAGCAATCTCAGAGTTGGATACTCTGAGTGAGGAGTCTTACAAAGATAGCACACTAATTATGCAGCTTTTGAGGGACAACCTGACATTGTGGACTTCTGACATTCCCGAAGATGGAGCTGATGAACAAAAGGTGGAGTCTGCCCGAGCTGCTGGAGGTGGAGATGCCGAGTAA 783 0.4585 MASTKERENFVYIAKLAEQAERYEEMVDAMKKVANLNVELTVEERNLLSVGYKNVVGSRRASWRILSSIEQKEEAKGNAVSVKRIKEYRQKVESELWNICNDIIEVIDELLIPSCSGGESSVFFYKMKGDYYRYLAEFKAGDERKEAAAHSMKAYQEASTTAEAELSPTHPIRLGLALNYSVFYYEILNSPERACYLAKQAFDEAISELDTLSEESYKDSTLIMQLLRDNLTLWTSDIPEDGADEQKVESARAAGGGDAE 260
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi03g0646 260 SMART 1433_4 7 248 IPR023410 -
Glsi03g0646 260 PIRSF 14-3-3 1 247 IPR000308 -
Glsi03g0646 260 Gene3D - 1 250 IPR036815 -
Glsi03g0646 260 Coils Coil 13 33 - -
Glsi03g0646 260 PRINTS 14-3-3 protein zeta signature 181 207 IPR000308 -
Glsi03g0646 260 PRINTS 14-3-3 protein zeta signature 39 68 IPR000308 -
Glsi03g0646 260 PRINTS 14-3-3 protein zeta signature 208 237 IPR000308 -
Glsi03g0646 260 PRINTS 14-3-3 protein zeta signature 154 180 IPR000308 -
Glsi03g0646 260 PRINTS 14-3-3 protein zeta signature 88 112 IPR000308 -
Glsi03g0646 260 PRINTS 14-3-3 protein zeta signature 119 141 IPR000308 -
Glsi03g0646 260 ProSitePatterns 14-3-3 proteins signature 1. 45 55 IPR023409 -
Glsi03g0646 260 Pfam 14-3-3 protein 14 235 IPR023410 -
Glsi03g0646 260 ProSitePatterns 14-3-3 proteins signature 2. 217 236 IPR023409 -
Glsi03g0646 260 PANTHER 14-3-3 PROTEIN 7 238 IPR000308 -
Glsi03g0646 260 SUPERFAMILY 14-3-3 protein 6 237 IPR036815 -
Glsi03g0646 260 MobiDBLite consensus disorder prediction 238 260 - -
Glsi03g0646 260 FunFam 14-3-3 protein epsilon 2 248 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi03g0646 Glsi-ChrGlsi03 16685964 16698432 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi03g0646 1 260 14-3-3 family AT2G42590 76.806 9.52e-147 410