Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi03g0633 ATGGCGGATTTGCAGGATTCTATCACGCCGCCGGCGACTCATCCTCGCCCGATGCCGGTCCGGGAAGATTGTTGGAGCGAGGAAGCTACCGCCACTCTCGTTGACGCCTGGGGCCGCCGTTTCCTCGAGCTTAACCGCGGAAACCTCCGCCAGAAAGACTGGCAGGACGTTGCGGACGCCGTCAATGCTCTCCATGGCCACACCAAAAAAACGCACCGTACAGACGTCCAGTGTAAGAACCGTATCGATACAATCAAGAAGAAGTATAAGATTGAGAAGAATAAGGTTTCGTCCCCCAATGGACCTGTTGCTTCATCGTGGCTGTTCTTTGACCGGTTAGACGCTTTGATTGGGTCCAGTTTTAATACGAAAAAGCCATCGCCGTCGCCTCCGGTGGCTCTCCCGTTGCCATATCGCAAAATCCAGTCCCCGGTGATTGCTGTGCCAGCGACAGTGGCACTGCCCCAGAAGCGGTCAGCAGCGACGGTTTTAGATGATGGGTATTTTAGGAGGAATTATTCAGCTGTGGCAGCTGCAGCAGCTGCAGCGGAGGCTGATGAGGACGAGGACGAAGAGGAGGAGGATGAGGAAGATGAAGAGAGGGGAAGTGAGCTTGAGGAGGGGGAGAAGGAAAGGGAAGGGATGAGAAGGTTGGCAAAGGCGATAGAGAGTTTTGGGGAAGTGTATGAGAGAGTGGAGGGAGAAAAGCTGAGGCAGATGGTGGATTTGGAGAAACAGAGGATGCAGTTTGCTAAAGATCTGGAAGTACAGAGGATGCAGATGTTTACGGACACACAGGTTCAGCTGGAGAGGATTAAGCGTGGAAAGAGATCTGGGTCTAATGATATATATAGCTAG 858 0.528 MADLQDSITPPATHPRPMPVREDCWSEEATATLVDAWGRRFLELNRGNLRQKDWQDVADAVNALHGHTKKTHRTDVQCKNRIDTIKKKYKIEKNKVSSPNGPVASSWLFFDRLDALIGSSFNTKKPSPSPPVALPLPYRKIQSPVIAVPATVALPQKRSAATVLDDGYFRRNYSAVAAAAAAAEADEDEDEEEEDEEDEERGSELEEGEKEREGMRRLAKAIESFGEVYERVEGEKLRQMVDLEKQRMQFAKDLEVQRMQMFTDTQVQLERIKRGKRSGSNDIYS 285
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi03g0633 285 PANTHER TRIHELIX TRANSCRIPTION FACTOR ASIL2 13 276 IPR044823 -
Glsi03g0633 285 MobiDBLite consensus disorder prediction 180 215 - -
Glsi03g0633 285 MobiDBLite consensus disorder prediction 1 20 - -
Glsi03g0633 285 FunFam trihelix transcription factor ASIL2 25 91 - -
Glsi03g0633 285 Coils Coil 178 200 - -
Glsi03g0633 285 Pfam Myb/SANT-like DNA-binding domain 22 116 IPR044822 -
Glsi03g0633 285 Gene3D - 25 91 - -
Glsi03g0633 285 MobiDBLite consensus disorder prediction 183 204 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi03g0633 Glsi-ChrGlsi03 15872167 15877174 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi03g0633 21 284 Trihelix Transcription Factor Family AT3G14180 32.092 2.19e-43 151
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Glsi03g0633 Myb_DNA-bind_4 2.4e-24 CL0123