Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi03g0614 ATGTCAGAAGGGCATGAGATTCATGACATTGAGAACAATGAGGAAACTTCATTGGGATCTAATTCCCAGAAATGTTCATCCTTCGACTTGAATGAAGAAGCTAGTAGCGAAGAGAACAATCACACAGACGAGGCCTGTGATGAACTCATCACAGCGGAGGAGAATGAGAAAGCAAAGGATCATGAGGCTGATTCATCAAATAGAAGCACATCAAGAGAATTAGGAAATGAACGAAGAGCCACAGTAAGGCAGTATGTTAGATCGAAGATGCCTCGGCTTCGGTGGACTCCTGACCTACATCTCTCCTTTGTGCATGCTGTTAAAAGGCTTGGAGGTCAAGAGAGAGCAACACCCAAGTTGGTGCTTCAGCTAATGAATGTGAGAGGACTCAGCATTGCTCATGTCAAGAGTCACTTGCAGATGTATCGAAGCAAGAAACTTGACGAATCTGGGCAAGTAATAAGTCAAACGTACAGGTCTACCCAGCTTGGTCGTATTTCTCAGCTATCGTATCAATCTATGAATACAAATCAACAATTCAAGATGGGAAATGGTGGAATTATTTTAGCAGGCAATTGCAACGAGCATGGTGTTCTTCAAGGTCTCACGAAGCCCTCTTTTACCCTTTCACACTCACATGCAAAGGCTGCAGATTCAAGGCACCAACAATGGTATTTCAATAATCAGCCTTTTCGAAGGCCAAGTAATTCCATACCAAGCAATGAAGTGATGCCCTCATCAACAACCTTACAAACTCAAGGAAGACCTGCAGTTTCAAGCCAGATTCTACTGAATGATACAACCAGCCGAATTGCACCCATGAGACCTAGCCAATTTCTGGAAGAGAAAAAGTGGCCTCTATTAGAAATTATCAGCAGTCATCAATGGAAGCAAAAAAAGTCACGTAACGATATTACTTGGCCAAATACAGGTTCACAATCTGCACTTGACCAACTTGGCACCACGCCTTCATCTGTTGGGGCAGCTGAATGGAGGCTAGAGAACAACACAAGAATCAGGGAAAATATTTCAAACGCCAATGACCCTAGCAACTATTCCAATAACAGTTTGAAGCTAGAATTTGAGCCCCCATTTCGGATTAAGTTAAATCAAGAGAAACTGCGGAAAGACGAGCAATGGTTGCCTGATTTGCAACTAGGATTAATGAGTCAGAGAGATGGCAACAATGATGATGCTGGCAAGGCAGATCATTACAGAGAAACGCAAGAAATTAGCACTAAGCTTTCCCTTTCTTAG 1257 0.428 MSEGHEIHDIENNEETSLGSNSQKCSSFDLNEEASSEENNHTDEACDELITAEENEKAKDHEADSSNRSTSRELGNERRATVRQYVRSKMPRLRWTPDLHLSFVHAVKRLGGQERATPKLVLQLMNVRGLSIAHVKSHLQMYRSKKLDESGQVISQTYRSTQLGRISQLSYQSMNTNQQFKMGNGGIILAGNCNEHGVLQGLTKPSFTLSHSHAKAADSRHQQWYFNNQPFRRPSNSIPSNEVMPSSTTLQTQGRPAVSSQILLNDTTSRIAPMRPSQFLEEKKWPLLEIISSHQWKQKKSRNDITWPNTGSQSALDQLGTTPSSVGAAEWRLENNTRIRENISNANDPSNYSNNSLKLEFEPPFRIKLNQEKLRKDEQWLPDLQLGLMSQRDGNNDDAGKADHYRETQEISTKLSLS 418
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi03g0614 418 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL7-LIKE 61 183 IPR046955 GO:0003700
Glsi03g0614 418 FunFam Myb family transcription factor 89 147 - -
Glsi03g0614 418 MobiDBLite consensus disorder prediction 34 83 - -
Glsi03g0614 418 NCBIfam myb-like DNA-binding domain, SHAQKYF class 91 146 IPR006447 GO:0003677
Glsi03g0614 418 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 87 147 IPR017930 -
Glsi03g0614 418 MobiDBLite consensus disorder prediction 14 33 - -
Glsi03g0614 418 MobiDBLite consensus disorder prediction 302 322 - -
Glsi03g0614 418 MobiDBLite consensus disorder prediction 396 410 - -
Glsi03g0614 418 MobiDBLite consensus disorder prediction 1 83 - -
Glsi03g0614 418 Gene3D - 90 147 - -
Glsi03g0614 418 SUPERFAMILY Homeodomain-like 89 145 IPR009057 -
Glsi03g0614 418 MobiDBLite consensus disorder prediction 301 322 - -
Glsi03g0614 418 MobiDBLite consensus disorder prediction 388 418 - -
Glsi03g0614 418 Pfam Myb-like DNA-binding domain 93 143 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi03g0614 Glsi-ChrGlsi03 14027460 14031556 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi03g0614 82 162 G2-like Transcription Factor Family AT2G42660 72.840 1.20e-34 127
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Glsi03g0614 Myb_DNA-binding 8.4e-07 CL0123