Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi03g0613 ATGGGGGTTAGATGGAACCAATTTGGATTATGGTTTAGAATTTATATTGGTTTGATTTCTTTGTGGAAAATTCGAGTTTGTTGGTCGCTTAACGATGAAGGATTTGCTTTGTTGGAATTCCGAAATAGAGTAACTTATGATCCTTATAGTGCTTTGGCAAATTGGAATCCAAAGGATTGTGATCCTTGCGGGTGGTTTGGTGTTCATTGCGTTAATGGTAGAGTGCAAATGCTCTACCTAAATGCGATATCTTTGGAAGGGACATTGGCCCCTGAGCTTGGGAAACTCAGTCACTTAAAATCTCTTGTATTGTACAAGAATAATTTCTTTGGTACCATCCCCAAAGAATTCGGAGATCTAGCCATGCTGGACTTATTGGATTTAAGGGACAATAACTTGACAGGAAGCATTCCAGCGGAAATTGGCAGGATGTTGTTGCTAAAACACTTGTTGCTTTGTGGCAATAAAATTGAAGTTAGTCAAGAGATTGGAAAGCCCAAATTGCCCTTTAAATGGTTATTTGTTGACAATTGCACATCACCTCCGACAACTGTTTTTGGCTGCTTGAATAGAAAGTTTGGAAACTGATTCTCTCTGGGAAATCTTGTTCATATTGATAAAGCTCTTTATGTGCCTTTGTTTACTTCTCATCGACTTATCCATGCTGAAAATATGAAGGATGAAGCATACTGGCGATTTCTTAATCATGGGAAAGAAACACAACTTCTTGCTTTCTGTTTTACAATTTATCGCATTCTTGAGCCATCTAAACTCAGAAACTTGCAAAATCATGGTGTAAGTGTGTGGAAGACCAATTTTATACAATGGTACAATGCTGATTCTTTAGTTATTCCATTTAAAGGAGCACTTGTGAAATACCTAAATACCTTGGCACTGCCACTGTTCAAGCACGGTAAGGCCGTTCCTGGTTGTGGAGAAAATTCCTGTGGAAAATATATCTTGCGTTGTGTAGGTTCTCATGAAGCAGAGGTTACCCAGGTTGTATCAAATCTTGTCAGTTCTGCACGTCGTAAGTTACTTGATCAGTCCAGTAACCTCGCAGCTGCACCTGTTAAAAGTGGGCCTACCAAACAGATCATTTCACTTCCAACTACCCTGAGTAGTGGAGCTTTCCCTGCCGTGCAGAAACAAAATCATTCACCTGCGCCACAGCCATCATCTCCTGGCCATCCACCTGATACTTTGAATCAAGGCCAGTCTTCCACTGAGAATCAAACTGACCAAAAAGATTCAGCTAATGGTGTTTCTGAAAATTTGTGGAAGTACATAATTATTTTTATTTCATTTGTGGCTGTGCTGGCCATTGTTGCTGTGGCCATCTTTTGCTTTTGGCGAGCACGAGCAGCAAAAGCAATAAGCCCTTGGAAGACAGGAATAAGTGGACAGTTGCAGAAAGCATTTGTAACAGGGGTCCCCAAGCTGAATCGACCCGAGCTAGAGACAGCCTGTGAGGATTTCAGCAATATCATCAATAGTTTTGATGATTGCACCATATACAAAGGAACACTGTCCAGTGGAGTTGAGATTGCTGTTGTTTCAACTCTAATCACCTCTTCCAAAGACTGGTCAAAGAACTCAGAGATGGCCTATAGGAAAAGGATTAGTACGTTGTCCCGTATAAACCACAAAAACTTCATCAATCTTATTGGCTACTGTGAGGAAGAAGAACCATTTACTAGGATGATGGTGTTTGAGTATGCTCCAAATGGATCCCTATTTGAGCATCTTCATGTTAAGGAAGATGAACATCTTGATTGGGGTGCAAGGATGAGGATTATTATGGGCACAGCTTATTCTTTGCAGTACATGCACCATGATCTGAACCCACCAGTCGCTCATTCCAACCTTAGTTCAGCTTCCATCTACTTAACAGATGATTTTGCTGCTAAGGTTGCAGAGATCAATCATTTTTGCAAGAAAGTTGCATCAGAAAATAAGTCAACTGAAGATGGATCAAACCATTCTGAATTACCACCCCATGTTGATCCTGAAACAAATGTCTATAACTTTGGAGTGTTGCTACTTGAAGTAATTTCTGGGAAACTCCCACACTCTGAAGAACAAGGCCATCTTGTGCAGTGGGATGCCGAATACTTGAATGATAAGCAAAGCATCAGCCATTTGATTGATCCAACTCTGCAGTCTTTTGAAAACAATGAACTTGATGTCATTTGTGAGGTAATCCAAGATTGCATCCAATCCGATCCGAGGTTAAGACCAACAATGAAGGACATTCTTTACAAATTGAGGGGAGTCATTGGCGTATCACCTGAACAAGCAGTCCCCAGACTTTCCCCACTCTGGTGGGCTGAACTGGAAATCTTGTCGCTGGAGGCCAATTAA 2364 0.4099 MGVRWNQFGLWFRIYIGLISLWKIRVCWSLNDEGFALLEFRNRVTYDPYSALANWNPKDCDPCGWFGVHCVNGRVQMLYLNAISLEGTLAPELGKLSHLKSLVLYKNNFFGTIPKEFGDLAMLDLLDLRDNNLTGSIPAEIGRMLLLKHLLLCGNKIEVSQEIGKPKLPFKWLFVDNCTSPPTTVFGCLNRKFGNXFSLGNLVHIDKALYVPLFTSHRLIHAENMKDEAYWRFLNHGKETQLLAFCFTIYRILEPSKLRNLQNHGVSVWKTNFIQWYNADSLVIPFKGALVKYLNTLALPLFKHGKAVPGCGENSCGKYILRCVGSHEAEVTQVVSNLVSSARRKLLDQSSNLAAAPVKSGPTKQIISLPTTLSSGAFPAVQKQNHSPAPQPSSPGHPPDTLNQGQSSTENQTDQKDSANGVSENLWKYIIIFISFVAVLAIVAVAIFCFWRARAAKAISPWKTGISGQLQKAFVTGVPKLNRPELETACEDFSNIINSFDDCTIYKGTLSSGVEIAVVSTLITSSKDWSKNSEMAYRKRISTLSRINHKNFINLIGYCEEEEPFTRMMVFEYAPNGSLFEHLHVKEDEHLDWGARMRIIMGTAYSLQYMHHDLNPPVAHSNLSSASIYLTDDFAAKVAEINHFCKKVASENKSTEDGSNHSELPPHVDPETNVYNFGVLLLEVISGKLPHSEEQGHLVQWDAEYLNDKQSISHLIDPTLQSFENNELDVICEVIQDCIQSDPRLRPTMKDILYKLRGVIGVSPEQAVPRLSPLWWAELEILSLEAN 787
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi03g0613 787 Gene3D Ribonuclease Inhibitor 29 192 IPR032675 -
Glsi03g0613 787 PANTHER PROTEIN MALE DISCOVERER 2 26 784 - -
Glsi03g0613 787 Pfam Leucine rich repeat N-terminal domain 31 70 IPR013210 -
Glsi03g0613 787 Pfam Protein tyrosine and serine/threonine kinase 504 755 IPR001245 GO:0004672|GO:0006468
Glsi03g0613 787 SUPERFAMILY L domain-like 28 158 - -
Glsi03g0613 787 FunFam Leucine-rich repeat receptor-like kinase 33 156 - -
Glsi03g0613 787 FunFam Inactive receptor-like serine/threonine-protein kinase 465 573 - -
Glsi03g0613 787 MobiDBLite consensus disorder prediction 398 418 - -
Glsi03g0613 787 MobiDBLite consensus disorder prediction 380 418 - -
Glsi03g0613 787 Gene3D Phosphorylase Kinase; domain 1 463 573 - -
Glsi03g0613 787 Gene3D Transferase(Phosphotransferase) domain 1 574 766 - -
Glsi03g0613 787 ProSiteProfiles Protein kinase domain profile. 367 760 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi03g0613 787 SUPERFAMILY Protein kinase-like (PK-like) 481 756 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi03g0613 Glsi-ChrGlsi03 13748728 13758633 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi03g0613 420 759 Receptor kinase-like Gene Family AT5G56040 27.642 4.55e-37 148
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VI-2 Glsi03g0613 PK_Tyr_Ser-Thr 1.7e-19 CL0016