Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi03g0574 ATGGACACTAGGTTCAACAGCAGAAGCAACAACAACAACAACCCATCTTTCAGTGAAGAGGACGACGCTGACATAGCTGAGTCTCCACCTTCCGCCATTTTTAACATCGACAGCTTAGTCACTTCCACTTCTTCCCCTAAAAGAAGGCGAGCCATAAAGAAAAGGGTGGTCCAAATTCCCATAAAAGACGTCGATGGGTCTCGGCTTAAAGGAGAGTGCAAAACTCCACCTTCCGATTCATGGGCGTGGAGAAAATATGGCCAGAAACCTATCAAAGGCTCCCCTTATCCTAGGTGTAGCAGTTCAAAGGGGTGCCCAGCAAGAAAACAAGTGGAGAGGAGCCGCATGGACCCCACCATGCTCGTCGTAACCTACTCTTACGAGCACAACCACCCTTGGCCGGCTTCTAGAAAGAACCACCACCACCGCAACAGCAACGTCAACTCTGCTTCCGCTACCGATAAACTCAACATCAAATCCGAACACGATATTCAGACTGATCCAGAGCCAGAACCCGATTCGGAGGAGAAATTCGCGGGTCCCAGCGACGATTCGTTGATCGCTACGGCGGATGAGTATGGTTGGTTCGGGGAGATGGAGCTCGCCGGAACGACATCGTCAGTTGTTTGGGAGAGTCGAATGTACACCGGGGACGATGCCGACGTGGGGTCGGTGCTTTTTCCGATGGGGGAAGAGGACGAGTCACTTTTCGCGGAGCTCGGAGAGTTGCCGGAGTGCTCGGTGGTTTTCGGGCGAGGATTGATGCAGAGGGAGGACGAGCGACGCCGGCGGTGTGGGACCACAAGAGGAGGTGCCGGATTGTTTGGCACGTTTCTCGAGGATAGGGATTAA 852 0.5329 MDTRFNSRSNNNNNPSFSEEDDADIAESPPSAIFNIDSLVTSTSSPKRRRAIKKRVVQIPIKDVDGSRLKGECKTPPSDSWAWRKYGQKPIKGSPYPRCSSSKGCPARKQVERSRMDPTMLVVTYSYEHNHPWPASRKNHHHRNSNVNSASATDKLNIKSEHDIQTDPEPEPDSEEKFAGPSDDSLIATADEYGWFGEMELAGTTSSVVWESRMYTGDDADVGSVLFPMGEEDESLFAELGELPECSVVFGRGLMQREDERRRRCGTTRGGAGLFGTFLEDRD 283
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi03g0574 283 MobiDBLite consensus disorder prediction 132 183 - -
Glsi03g0574 283 MobiDBLite consensus disorder prediction 1 31 - -
Glsi03g0574 283 MobiDBLite consensus disorder prediction 93 113 - -
Glsi03g0574 283 Pfam WRKY DNA -binding domain 79 132 IPR003657 GO:0003700|GO:0006355|GO:0043565
Glsi03g0574 283 SMART WRKY_cls 77 133 IPR003657 GO:0003700|GO:0006355|GO:0043565
Glsi03g0574 283 Gene3D WRKY domain 68 135 IPR036576 GO:0003700|GO:0006355|GO:0043565
Glsi03g0574 283 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 17 248 IPR044810 GO:0003700
Glsi03g0574 283 SUPERFAMILY WRKY DNA-binding domain 76 134 IPR036576 GO:0003700|GO:0006355|GO:0043565
Glsi03g0574 283 ProSiteProfiles WRKY domain profile. 78 134 IPR003657 GO:0003700|GO:0006355|GO:0043565
Glsi03g0574 283 MobiDBLite consensus disorder prediction 1 19 - -
Glsi03g0574 283 MobiDBLite consensus disorder prediction 156 180 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi03g0574 Glsi-ChrGlsi03 11978469 11979899 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi03g0574 27 250 WRKY Transcription Factor Family AT1G29280 51.064 8.12e-70 215
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Glsi03g0574 WRKY 1.1e-18 CL0274