Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi03g0517 ATGGGTTCACTTGAAACCAATCCAGCAAGTGAGTTCTTTCAAGCTCAAGCTCACTTGTATAACCACATTTACAGCTACCTAAGTTCCATGGCTCTGAAATGTGCTGTTCAGCTCAGCATACCGGACCTAATCCACAAGCATGGCCGACCCATTACCCTTCCTGAATTGGTCTCCAATCTTGACGTTCATCCAACCAAAACTGGTTATGTGGATAGGCTTGTGCGGTTGCTGGTGCACAATGGTTTCTTAGCTGAAACTAAAGTCTTTGAGGACAAAGAAGAAAAGGAGGCATATATTCTGACTCCCCCTTCTAAGTTCCTCCTCAAAGACAGGGACCCCTGTCTAACCTCAATGGTTATGGGGTTTGTTGAGCCTGGTCTGGTCAATTCATGGAACTTCTTGGGTAGTTGGTTTTGTGGGGAGGAGAAGACACTGGTAGAGAGTGCTTTTGGTGTAGGCTTCTGGGATCTGCTTGGGCAAGATCCTGAATATATGAAGTCCTTCAATGAAGGCATGGCCAGTGATTCCCAAATGATCAACATGGCACTGAGAGATTGCAAGTCAGTTTTCAAGGGTCTGGATTCCTTGGTCGATGTAGGAGGTGGTACTGGCACCACTGCCAGGATTATCTCTGAGGCATTTCCTCATCTGAAATGCATTGTGTTTGATCTTCCACAAGTTATAGCAAACTTGTCAGGAAGCAAGAATTTGGGTTATGTTGGTGGGAACATGTTTGAATCTGTTCCTTCTGCTGATGCAGTATTATTAAAGTGGGTTTTACATAACTGGAGCGATGAAGATTGTATTAAAATTCTGAAGAACTGTAAGGAAGCTATTTCTAAGAAAGGCGATGGAGGGAAGGTGATAGTGATCGATGTAGTGATAAATGAAAAGAAAGATGAGCATGAAATGACACAAGTGAAGCTCTTTTATGACATAGTTATGATGGCTACTCTGAATGGGAAAGAAAGAAATGAAGAAGAATGGGACAAACTCTTCCTTGGAGCAGGCTTCAAGAGCTACAAGATAACTCCTATATTTGGTTTTAGGTCCCTTATTGAAGCATATCCTTAA 1074 0.4274 MGSLETNPASEFFQAQAHLYNHIYSYLSSMALKCAVQLSIPDLIHKHGRPITLPELVSNLDVHPTKTGYVDRLVRLLVHNGFLAETKVFEDKEEKEAYILTPPSKFLLKDRDPCLTSMVMGFVEPGLVNSWNFLGSWFCGEEKTLVESAFGVGFWDLLGQDPEYMKSFNEGMASDSQMINMALRDCKSVFKGLDSLVDVGGGTGTTARIISEAFPHLKCIVFDLPQVIANLSGSKNLGYVGGNMFESVPSADAVLLKWVLHNWSDEDCIKILKNCKEAISKKGDGGKVIVIDVVINEKKDEHEMTQVKLFYDIVMMATLNGKERNEEEWDKLFLGAGFKSYKITPIFGFRSLIEAYP 357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi03g0517 357 Pfam O-methyltransferase domain 131 339 IPR001077 GO:0008171
Glsi03g0517 357 FunFam Coniferyl alcohol 9-O-methyltransferase 3 107 - -
Glsi03g0517 357 SUPERFAMILY "Winged helix" DNA-binding domain 10 111 IPR036390 -
Glsi03g0517 357 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 20 357 IPR016461 GO:0008168
Glsi03g0517 357 PANTHER O-METHYLTRANSFERASE 13 342 IPR016461 GO:0008168
Glsi03g0517 357 Gene3D Vaccinia Virus protein VP39 108 357 IPR029063 -
Glsi03g0517 357 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 114 356 IPR029063 -
Glsi03g0517 357 Gene3D - 2 107 IPR036388 -
Glsi03g0517 357 CDD AdoMet_MTases 196 295 - -
Glsi03g0517 357 PIRSF O-mtase 1 357 IPR016461 GO:0008168
Glsi03g0517 357 FunFam O-methyltransferase ZRP4 109 357 - -
Glsi03g0517 357 Pfam Dimerisation domain 30 78 IPR012967 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi03g0517 Glsi-ChrGlsi03 9705993 9707750 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi03g0517 30 343 Monolignol Biosynthesis Gene Families AT5G54160 35.423 4.82e-56 185