Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi03g0478 ATGGTTTCTTCTGAAACCACCGTAGAACACTCTACTAGAAGAACCTATTATTCTCCTCAAGTCCAGAAGAAGAGGAAGAACCCTGACGCTGCAAGAAAGAGGGTTCAAGGTTCTAATCCAGAAGAGAGACGATGGGGCTATTCTACAACGTTGAAGCTCTACGAGGACCCATGGAAGATTAAGAAAGTTCTCACAGGAAGTGACATTCACGGGGGCTTGAACCGACTCTTGATGGCCACAGATTTGGTCAAAGATTTAGTGTTGCCTGTGCTGAAAGATGATGACGAACGTAGAAATGCAGGGACTGAAGAAGGAACTGAGGTTAGGTTTTGGGATGTGAACACCAACTCTATGCACTTTCTACTCCTCAAGAGATGGGTAAGTACTGGAAGCTTTGTATTTATCGGGAAGTGGCATCAAGATTTTGTGAAAAGAAGGAATCTGAAGAAAGGGGATGAGATTGGACTTCACTGGGATTCCTACAAAGAACGATTTAACTTTTCTGTTCTTCAGCATTCTGCTGTTTGA 528 0.4337 MVSSETTVEHSTRRTYYSPQVQKKRKNPDAARKRVQGSNPEERRWGYSTTLKLYEDPWKIKKVLTGSDIHGGLNRLLMATDLVKDLVLPVLKDDDERRNAGTEEGTEVRFWDVNTNSMHFLLLKRWVSTGSFVFIGKWHQDFVKRRNLKKGDEIGLHWDSYKERFNFSVLQHSAV 175
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi03g0478 175 CDD B3_DNA 58 170 IPR003340 GO:0003677
Glsi03g0478 175 MobiDBLite consensus disorder prediction 1 41 - -
Glsi03g0478 175 SUPERFAMILY DNA-binding pseudobarrel domain 57 165 IPR015300 -
Glsi03g0478 175 Gene3D - 56 173 IPR015300 -
Glsi03g0478 175 MobiDBLite consensus disorder prediction 1 22 - -
Glsi03g0478 175 PANTHER TRANSCRIPTION FACTOR B3-DOMAIN FAMILY-RELATED 26 172 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi03g0478 Glsi-ChrGlsi03 8786414 8786941 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi03g0478 52 157 RAV Transcription Factor Family AT1G50680 32.110 5.19e-06 43.5