Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Glsi03g0471 | ATGTGGGAAAGAAGAAGGGAAAATCCAGGGCCTGAGAACTCTGTTCCTGTCCATTTTGTTTCCTCCCATCCCCAGCTTGCAGCAATGGCCTTCCCAAACCAACCCATGTCAGTTTCTCCTCAGAGAAAGATGGGAAGGGGAAAGATTGAGATCAAAAGGATTGAGAACACCACAAATCGCCAAGTGACCTTCTGTAAGCGCAGAAATGGCCTACTAAAGAAGGCATATGAACTATCTGTGCTTTGTGATGCTGAGGTTGCTCTAATCGTCTTCTCTACCCGTGGCCGCCTCTATGAATATGCTAATAACAGTGTCAAAGCAACAATTGAGAGGTACAAGAAAGCATGTTCAGATTCATCTGGGAGTACATCTGCTTCTGAAGCTAATGCTCAGTTTTACCAGCAAGAAGCAGCCAAACTGCGTGCTCAAATCAGTAACCTGCGGAATAACAACAGGCAAATGATGGGTGAGACTTTGGGCAGTATGAATGCCAAGGAACTCAAGAACTTGGAGGCTAAGTTAGAAAAAGGGATTAGCAGAATTCGTTCCAAAAAGAATGAGCTGATATTTGCAGAAATTGAGTATATGCAGAAGAGGGAAGTAGACTTGCACAATAACAACCAGCTTCTTCGAGCTAAGATAGCTGAAGTTGAGAGGAGCCAGCAGCATAACATGAACATGATGCATGGAGGAACGAACTATGAATCTCTGCAATCTGAGCAGCAATTTGAGTCTCGAGGCTTCTTCCAAGTGACTGGATTACAACCCAGTAATCAGTATGCACCGCAAGACCAGATGGCCCTTCAGTTAGTGTAA | 816 | 0.4449 | MWERRRENPGPENSVPVHFVSSHPQLAAMAFPNQPMSVSPQRKMGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSTRGRLYEYANNSVKATIERYKKACSDSSGSTSASEANAQFYQQEAAKLRAQISNLRNNNRQMMGETLGSMNAKELKNLEAKLEKGISRIRSKKNELIFAEIEYMQKREVDLHNNNQLLRAKIAEVERSQQHNMNMMHGGTNYESLQSEQQFESRGFFQVTGLQPSNQYAPQDQMALQLV | 271 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Glsi03g0471 | 271 | ProSiteProfiles | K-box domain profile. | 130 | 220 | IPR002487 | GO:0003700|GO:0005634|GO:0006355 | |
Glsi03g0471 | 271 | ProSiteProfiles | MADS-box domain profile. | 44 | 104 | IPR002100 | GO:0003677|GO:0046983 | |
Glsi03g0471 | 271 | PANTHER | SERUM RESPONSE FACTOR HOMOLOG | 44 | 226 | - | - | |
Glsi03g0471 | 271 | Pfam | K-box region | 127 | 214 | IPR002487 | GO:0003700|GO:0005634|GO:0006355 | |
Glsi03g0471 | 271 | CDD | MADS_MEF2_like | 45 | 114 | IPR033896 | GO:0000977|GO:0045944 | |
Glsi03g0471 | 271 | Pfam | SRF-type transcription factor (DNA-binding and dimerisation domain) | 53 | 100 | IPR002100 | GO:0003677|GO:0046983 | |
Glsi03g0471 | 271 | SMART | madsneu2 | 44 | 103 | IPR002100 | GO:0003677|GO:0046983 | |
Glsi03g0471 | 271 | Coils | Coil | 167 | 187 | - | - | |
Glsi03g0471 | 271 | PRINTS | MADS domain signature | 81 | 102 | IPR002100 | GO:0003677|GO:0046983 | |
Glsi03g0471 | 271 | PRINTS | MADS domain signature | 66 | 81 | IPR002100 | GO:0003677|GO:0046983 | |
Glsi03g0471 | 271 | PRINTS | MADS domain signature | 46 | 66 | IPR002100 | GO:0003677|GO:0046983 | |
Glsi03g0471 | 271 | FunFam | agamous-like MADS-box protein AGL11 | 56 | 139 | - | - | |
Glsi03g0471 | 271 | Coils | Coil | 130 | 157 | - | - | |
Glsi03g0471 | 271 | Gene3D | - | 56 | 153 | IPR036879 | GO:0003677|GO:0046983 | |
Glsi03g0471 | 271 | SUPERFAMILY | SRF-like | 45 | 116 | IPR036879 | GO:0003677|GO:0046983 | |
Glsi03g0471 | 271 | ProSitePatterns | MADS-box domain signature. | 46 | 100 | IPR002100 | GO:0003677|GO:0046983 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Glsi03g0471 | Glsi-ChrGlsi03 | 8612570 | 8622592 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Glsi03g0471 | 42 | 271 | MADS-box Gene Family | AT3G58780 | 66.809 | 9.71e-108 | 310 |