Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi03g0458 ATGTGCTCGGAGAATGCGAGTCTAGGTGGAGCCATTTTCATTCCAGAAGATCTACATAGCGGAAAAGAGGAAAGGCAAGAGCTTGCACCAAGAAAACGAGAGAAAATGGTGGTCGAAGATGCACCAAAATCCACCGTCGCCGACGACCAAATCGGTAACATCAGCACGAATCCCAATACTAGGGTTCGTGACTGCGACGAGGATGAGCTCGAGGAGGGAGAGATAATCGGAGATGACGACTCTGCTACTTCGAAGCCATCTTCCACCGTCGTGCGTGAGCCTCACCCGCTTGAGAATTCTTGGACCTTCTGGTTCGATAACCCCTTTGCCAAGTCCAAGCAAGCCACTTGGGGGAGTTCTATGCGACCCATCTATACCTTTGCTACAGTTGAGGAGTTTTGGAGCATTTACAACAACATACATCATCCGAGCAAGTTGGCCGTGGGAGCAGACTTCCATTGTTTCAAATATAAAATTGAGCCCAAATGGGAGGACCCTGTTTGTGCTAACGGGGGAAAATGGACTGTCGCGTTTCCCAGGGGAAAATCTGATACATGTTGGTTATATACGCTGCTGGCAATGATTGGAGAACAATTTGATCACGGAGATGAAATTTGTGGAGCAGTAGTAAATGTCAGGAATAGGCAAGACAAAATTGCAATTTGGACTAAGAATGCTTCAAATGAAGCAGCTCAGCTGAGCATTGGAAAACAGTGGAAGGAATTTCTCGATTATAATGAAACCATTGGCTTCATATTTCATGAGGATGCAAAGAAGCTCGACAGAGCTGCAAAAAATAGATACACCATATGA 813 0.4588 MCSENASLGGAIFIPEDLHSGKEERQELAPRKREKMVVEDAPKSTVADDQIGNISTNPNTRVRDCDEDELEEGEIIGDDDSATSKPSSTVVREPHPLENSWTFWFDNPFAKSKQATWGSSMRPIYTFATVEEFWSIYNNIHHPSKLAVGADFHCFKYKIEPKWEDPVCANGGKWTVAFPRGKSDTCWLYTLLAMIGEQFDHGDEICGAVVNVRNRQDKIAIWTKNASNEAAQLSIGKQWKEFLDYNETIGFIFHEDAKKLDRAAKNRYTI 270
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi03g0458 270 FunFam Eukaryotic translation initiation factor 4E 86 270 - -
Glsi03g0458 270 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4E RELATED 59 258 IPR001040 GO:0003723|GO:0003743|GO:0006413
Glsi03g0458 270 MobiDBLite consensus disorder prediction 17 42 - -
Glsi03g0458 270 Gene3D RNA Cap, Translation Initiation Factor Eif4e 87 270 IPR023398 -
Glsi03g0458 270 ProSitePatterns Eukaryotic initiation factor 4E signature. 151 174 IPR019770 GO:0003723|GO:0003743|GO:0005737|GO:0006413
Glsi03g0458 270 MobiDBLite consensus disorder prediction 17 93 - -
Glsi03g0458 270 Pfam Eukaryotic initiation factor 4E 96 248 IPR001040 GO:0003723|GO:0003743|GO:0006413
Glsi03g0458 270 SUPERFAMILY eIF4e-like 84 266 IPR023398 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi03g0458 Glsi-ChrGlsi03 8125564 8132539 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi03g0458 36 269 Eukaryotic Initiation Factors Gene Family AT4G18040 67.521 5.20e-116 331