Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi03g0409 ATGATGAGAAAGATCTCAAGACATGCTGCTTCATTGAAAGTTACGAACTTGAATGAGACGCTAATGTCTCTGACAAGCACTCTAATTTGCAGGGTTGCTTTTGGGAAAAGGTACGAGGAGGAAGGGGTTGAGAGAAGCAAGTTCCATGGGCTGCTTAATGAGCTGCAGGCCATGATGGGTAGTTTCTTTTTCACAGATTATATTCCTTTCTTGGGGTGGATTGATAGATTCAGGGGATTGATTGGTCGTCTTGAAAGAAACTTCAAGGAGTTGGACGCGTTTTACCAAGAAGTCATTGACGAACACCTTGATCCAAGAAGACAGAAACCTGCAGAAGAAGAAGACATAATTGATGTCTTGCTTCATCTGAAGAAGCAGTGTTGGTTTTCAATAGATCTCACTTTCGACCACATCAAAGCTGTACTCATGGACGTTCTTGCAGCGGCAACAGATACAAGCACAGCCACATTAGTTTGGGCTATGACCGAGTTAATGAAAAATCCGAGAGCAATGCAGAAAGCTCAAGCAGAGGTTAGAAAACTGTATGGTACGAGAGATTTTATAAATGAAGATGACATTAAAAACCTTACTTATCTGAAGGCAGTGATAAAAGAGACATTATTGAGATTGCACCCACCAGCACCACTGCTTGTACAAAGAGAAACAAATAAAAAATGCATCATAGAAGGGTATGAAATTCCAGCCAAAACATTAGTGTTTGTGAATGCTTGGGCTATTCAAAGAGACCCTGAAGCATGGAAAGACCCAGAAGAGTTTTATCCCGAAAGGTTTGTGGATAGTGCCATTGATTTTAAGGGACAAAATTTTGAGCTGATTCCATTTGGGGCAGGCCGAAGAATGTGCCCAGGCTTACCCATGGGAGTTGCTACAGTGGAGCTTATACTTGCCAACCTTCTTTATTCATTTGATTGGGAAATGCCTGCAGGGATGAAGAGAGAAGATATAGACACAGAAGTGCTCCCAGGAATTACCCAACATAAGAAAAATCCTCTATGCCTTGTTGCCAAGCATCTAAGGAACACAATCCAGCAATGGATGATAAGAAAGGTAGAATTGCTGTCTATCCCCCTGTTTTTTAGTGCTTTAGCCGGCAATGAACTTGTTTCTTGTGGGAAATGA 1140 0.4167 MMRKISRHAASLKVTNLNETLMSLTSTLICRVAFGKRYEEEGVERSKFHGLLNELQAMMGSFFFTDYIPFLGWIDRFRGLIGRLERNFKELDAFYQEVIDEHLDPRRQKPAEEEDIIDVLLHLKKQCWFSIDLTFDHIKAVLMDVLAAATDTSTATLVWAMTELMKNPRAMQKAQAEVRKLYGTRDFINEDDIKNLTYLKAVIKETLLRLHPPAPLLVQRETNKKCIIEGYEIPAKTLVFVNAWAIQRDPEAWKDPEEFYPERFVDSAIDFKGQNFELIPFGAGRRMCPGLPMGVATVELILANLLYSFDWEMPAGMKREDIDTEVLPGITQHKKNPLCLVAKHLRNTIQQWMIRKVELLSIPLFFSALAGNELVSCGK 379
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi03g0409 379 CDD CYP71-like 1 338 - -
Glsi03g0409 379 SUPERFAMILY Cytochrome P450 4 342 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi03g0409 379 Pfam Cytochrome P450 2 336 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi03g0409 379 PANTHER CYTOCHROME P450 71B11-RELATED 1 343 - -
Glsi03g0409 379 Gene3D Cytochrome P450 1 350 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi03g0409 379 PRINTS P450 superfamily signature 279 288 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi03g0409 379 PRINTS P450 superfamily signature 148 165 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi03g0409 379 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 281 290 IPR017972 GO:0005506|GO:0016705
Glsi03g0409 379 PRINTS E-class P450 group I signature 278 288 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi03g0409 379 PRINTS E-class P450 group I signature 137 154 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi03g0409 379 PRINTS E-class P450 group I signature 157 183 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi03g0409 379 PRINTS E-class P450 group I signature 242 266 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi03g0409 379 PRINTS E-class P450 group I signature 288 311 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi03g0409 379 PRINTS E-class P450 group I signature 24 42 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi03g0409 379 FunFam Predicted protein 146 340 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi03g0409 Glsi-ChrGlsi03 6943095 6946175 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi03g0409 1 345 Cytochrome P450 AT4G31500 50.430 6.59e-122 360