Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi03g0387 ATGTCTGATGAACCTAAAGAACTTTTTTACCAGGATCTTGTCCCAGACCATAATCAGCAAGCCATGTACTCTGAAAATAACTTTTCTAGTTCATCAGCTTATGATTCACACGCCTTTGCTGATCCCTCTTACATAAGCTTCACTGAATGTTTGCAAGGAGCTATGGACTACAATTCACTAGCAGCTTCTTTTGGCTCATCAGAGGTATTTTTATCTGGTGAAGGAAATCAGAAACAGCCAGCAGAAGCCGGAGATTTAAGCGGTGGCAGTGAAACTCCGGTGACCCAGAACTCATCGCTCTCTTCCTCTTCTAATTCTGAAGCTGGAGCTGAAGAAGATTCAGGGAAAAACGGCCAGGTGAAAGGTGAAGAAGGAGGAGAAAGATCTAAGAGTAAAGGGAACAAAGGAAAGAAAAAAGGAGAGAAGAAGCAGAAGGAGCCAAGGTTTGCCTTCATGACTAAGAGTGAGGTTGATCAGCTAGAAGATGGATACCGATGGAGAAAATATGGACAGAAAGCTGTCAAGAATAGCCCTTACCCAAGGAGCTACTACAGGTGCACTACACAAAAGTGCACAGTGAAGAAACGTGTGGAGAGGTCATTTCAAGACCCAACCACTGTGATAACAACGTATGAAGGTCAGCACAACCATCCTGTCCCCACTTCGTTGAGAGGGAATAATGCTGCTGCTGGATTATTGTTCACACCTCCTTCTTCTATGTTTCTAACAACACCCGCTCCACTACTCGCACCAGGGTCAAACTTCCCACAAGATCATTTGCTTCGTCAGATTGCTCATAGTAACCTCATCAATACCAACCAAACAACTCTTGCTTCTGCAGGAGGCTCCATTTATAATTCACAAAGTTACCATCAGCTTCCTCCTGACTATGGCCTCCTTCAAGACATAGTCCCTTCCATGTTCTTCAAACAAGAGCCATAA 942 0.4406 MSDEPKELFYQDLVPDHNQQAMYSENNFSSSSAYDSHAFADPSYISFTECLQGAMDYNSLAASFGSSEVFLSGEGNQKQPAEAGDLSGGSETPVTQNSSLSSSSNSEAGAEEDSGKNGQVKGEEGGERSKSKGNKGKKKGEKKQKEPRFAFMTKSEVDQLEDGYRWRKYGQKAVKNSPYPRSYYRCTTQKCTVKKRVERSFQDPTTVITTYEGQHNHPVPTSLRGNNAAAGLLFTPPSSMFLTTPAPLLAPGSNFPQDHLLRQIAHSNLINTNQTTLASAGGSIYNSQSYHQLPPDYGLLQDIVPSMFFKQEP 313
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi03g0387 313 ProSiteProfiles WRKY domain profile. 155 220 IPR003657 GO:0003700|GO:0006355|GO:0043565
Glsi03g0387 313 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 71 262 IPR044810 GO:0003700
Glsi03g0387 313 SMART WRKY_cls 160 219 IPR003657 GO:0003700|GO:0006355|GO:0043565
Glsi03g0387 313 MobiDBLite consensus disorder prediction 73 150 - -
Glsi03g0387 313 MobiDBLite consensus disorder prediction 89 112 - -
Glsi03g0387 313 MobiDBLite consensus disorder prediction 114 131 - -
Glsi03g0387 313 FunFam WRKY transcription factor 57 146 220 - -
Glsi03g0387 313 Pfam WRKY DNA -binding domain 161 218 IPR003657 GO:0003700|GO:0006355|GO:0043565
Glsi03g0387 313 Gene3D WRKY domain 136 221 IPR036576 GO:0003700|GO:0006355|GO:0043565
Glsi03g0387 313 SUPERFAMILY WRKY DNA-binding domain 152 220 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi03g0387 Glsi-ChrGlsi03 6528899 6530711 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi03g0387 41 313 WRKY Transcription Factor Family AT4G18170 51.379 2.47e-66 209
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Glsi03g0387 WRKY 1.3e-25 CL0274