Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi03g0378 ATGGCTGCTTCAACAATGGCTCTTTCTTCTCCATCATTAGCTGGGCAAGCAGTGAAACTTCCCCCTTCCACCCCTGAACTTGGGGGTGGAAGGTTCTTCATGAGAAAAACAGCTTCTAAGTTGGTTTCTTCCAGAAGCCCATGGTACGGCCCGGACCGTGTCAAGTACTTGGGCCCATTTTCTGGTGAGGCTCCGTCTTACTTGACTGGCGAATTTCCTGGTGATTACGGTTGGGACACTGCTGGACTCTCTGCTGACCCAGAGACTTTTGCTAGAAACCGTGAGCTTGAAGTCATCCATTGTAGATGGGCCATGCTTGGAGCTTTGGGTTGTGTCTTTCCTGAGCTTTTGGCCCGCAACGGTGTCAAATTTGGCGAGGCTGTATGGTTTAAGGCCGGAGCCCAGATCTTCAGCGAGGGAGGGCTTGACTACTTGGGCAATTCGAGTTTGATCCACGCACAGAGCATCTTGGCCATTTGGGCTGTTCAAGTGGTCTTAATGGGTGCCGTTGAGGGTTATCGTATTGCCGGTGGGCCTCTCGGTGAGGTGACAGACCCACTCTACCCAGGTGGAAGCTTTGACCCATTGGGCTTAGCTGATGACCCAGAGGCTTTTGCTGAGCTGAAGGTGAAGGAAATCAAGAATGGGAGATTGGCTATGTTCTCAATGTTTGGTTTCTTTGTTCAGGCCATTGTGACTGGAAAAGGCCCATTGGAGAACCTTGCAGACCACCTGGCTGACCCAGTTAACAACAACGCTTGGGCCTATGCCACAAATTTTGTTCCAGGAAAAAAGCCCTTGACCAGAGGAGGAAAAAGAAAAATGCGACCCCCACCACCCCCACCGTCTCTGCATTCCAATTTCTTCTCCTCTCTAAGACAGGTTGAGAAGCGACTGAAATTAGAGCACCCGCCGCAGACAGAATCTCAGATTGCAGAATCTGACTTTTCATCAAGTGGGTCATTGAGTGCGCCCATGTTCCTCCACGTGGATCAACCCATCGTCGTGAATGCTGCTGACCAGGACAGTAGCGAACCTCCTCGTGCTTTCCTCTCTGTTTCCCCAGATTTTCCATTGATTCATCAAGACCCACCTCAGAAAAGTGCTTCAGATCGCTGTGGGATTGTCGATGAAGCTGAAGATGACGAAGTGGATGATATTGACCGGTTAATGCAGCTATTGGGCTTATCAGAGGAAAATGAAGAAAGACAAAGGGTTGGTTTTTTTGAGGATGATAATGATTGTAATTCTTGTCATTGTGAAGATGGGTTTTATTCGAAGATTGTTGGAGTGAAGGGGCCAAAGTGTAGGAAGGAAATGCAGAGGCTAGATGGGTGGATTAAGCACTTTCTGAAAGGCGATGGAGAGGAGAAGAAAGAGCCCTTAAGATTGGCACACTTGCTTTTAGGGAAAGCTGCTTTTATTTCTGAGGGTGCTGATGGTGGTTTAGACTTGGAGTTTCCTTCAACCGTACAAGAATTTCTTCATAATGATCCTCCCAGTGATCGAGACAACTAG 1518 0.4848 MAASTMALSSPSLAGQAVKLPPSTPELGGGRFFMRKTASKLVSSRSPWYGPDRVKYLGPFSGEAPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNSSLIHAQSILAIWAVQVVLMGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGKKPLTRGGKRKMRPPPPPPSLHSNFFSSLRQVEKRLKLEHPPQTESQIAESDFSSSGSLSAPMFLHVDQPIVVNAADQDSSEPPRAFLSVSPDFPLIHQDPPQKSASDRCGIVDEAEDDEVDDIDRLMQLLGLSEENEERQRVGFFEDDNDCNSCHCEDGFYSKIVGVKGPKCRKEMQRLDGWIKHFLKGDGEEKKEPLRLAHLLLGKAAFISEGADGGLDLEFPSTVQEFLHNDPPSDRDN 505
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi03g0378 505 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 1 264 IPR001344 GO:0009765|GO:0016020
Glsi03g0378 505 SUPERFAMILY Chlorophyll a-b binding protein 47 261 - -
Glsi03g0378 505 MobiDBLite consensus disorder prediction 266 286 - -
Glsi03g0378 505 Pfam Chlorophyll A-B binding protein 64 230 IPR022796 -
Glsi03g0378 505 Gene3D Chlorophyll a/b binding protein domain 55 257 - -
Glsi03g0378 505 FunFam Chlorophyll a-b binding protein, chloroplastic 55 257 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi03g0378 Glsi-ChrGlsi03 6369117 6371824 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi03g0378 1 264 Chloroplast and Mitochondria Gene Families AT1G29930 86.517 3.94e-164 463