Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi03g0363 ATGGAACATTCTTGCGAGGTTTACCCACAAATTATTCTTTCTGGTTCTGTCTCAGAAAATTTACTGTCTCCCAACGATGATCATCAATACTTCATTATTAAAGTCCATTACAATGAAAACTTCTGCGTACCGCGTGATCTCAATTCCTCGGGGGCTATTTGTTATACCAGAGTGCTTGTTTCCTCGGATTTACCAAAGGACGAGGTAGAACAAGAAACGCACGAGATGCTTTCTTATTTGAGGGTGCCTGAGGAAACTCGCGACTTCATGGCAGCGAAAATCTTGTCCTGTGCAGATCATATGGCTAATGTTACACACACGGAATACAAGATTCTTCGTATGACTGTGTTTATGTCGGTCACTTGGTACGATGAAGATGACCAGGTTGTGCAGGAAGCTATGGAGAATCAAGGGCATGGGTTGGTGCCTGCACGTAACTCAGCCATTGATGAATTGGAGAGAGTGAAGGTTATGGAAAAGTGCAACTGTACAATTTGTTTAGGAGACTTCGAAGTTGATTCACAAGGTGTTCGTATGCCTTGCTTGCACTTATTTCATGAAAATTGTATAGTTAATTGGCTGCAGAATGGTCACTGTTGCCCTTTGTGTCGCTTTCAGATGCCTACCAGTAAAAGCGAATGA 642 0.4252 MEHSCEVYPQIILSGSVSENLLSPNDDHQYFIIKVHYNENFCVPRDLNSSGAICYTRVLVSSDLPKDEVEQETHEMLSYLRVPEETRDFMAAKILSCADHMANVTHTEYKILRMTVFMSVTWYDEDDQVVQEAMENQGHGLVPARNSAIDELERVKVMEKCNCTICLGDFEVDSQGVRMPCLHLFHENCIVNWLQNGHCCPLCRFQMPTSKSE 213
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi03g0363 213 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 129 210 IPR013083 -
Glsi03g0363 213 PANTHER E3 UBIQUITIN-PROTEIN LIGASE PRAJA 86 208 - -
Glsi03g0363 213 Pfam Ring finger domain 162 204 IPR001841 -
Glsi03g0363 213 SUPERFAMILY RING/U-box 152 209 - -
Glsi03g0363 213 SMART ring_2 163 203 IPR001841 -
Glsi03g0363 213 ProSiteProfiles Zinc finger RING-type profile. 163 204 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi03g0363 Glsi-ChrGlsi03 6039971 6040612 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi03g0363 127 209 C3H Transcription Factor Family AT5G01980 37.778 7.44e-14 67.8