Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi03g0362 ATGGAAAATTACTGTGAAGCTTACCCATTAGATATTGCTACTGATTCTTTCTCAGAAAATCCATTATCTCTCGGTGATAGTCAGTACTTCAGTATCAAGGCCCGCTGTGAAAATTTTTACGTACCAGATTCTGTCAACTACTTGGGGCCTCTTTGTTGTATCTTTGAGCATGCTGTCTCGAACATCCCAATGGAGGCAATGGAGCAAGAAGCAGACGCATTGCTTTCCTTTTCAAGTGTGCCCGAGGATGCTCGCAACTTCATGGCAGACAAGATCTTGGCTTGTGCGAATAATATGGCTAATGTTACACATAAGAACCAGAAAATTCTGCATATGAGTGTGTTTATTTCAATCACTCGGTTAGTTCATGGAGATGGAGTTGTGGTGGAATCTATGGAGGATCGTGGGCATGGCTCGGCCATGGAGGGATTGGAGAAGGTGAAGGTGACGGAAAAGTACGACTGTGCAATTTGCTTACAGGATTTTGAGGTTGATTCAGAAGGTGTTCGTATGCTTTGCTTGCACTTATTTCATAGAACTTGTATGGTTAATTGGTTGCAGAGAAGCCGTTCTTGCCCTTTGTGTCGCTTTCAGATGCCTACTAATGAAAGTGAATGA 618 0.4288 MENYCEAYPLDIATDSFSENPLSLGDSQYFSIKARCENFYVPDSVNYLGPLCCIFEHAVSNIPMEAMEQEADALLSFSSVPEDARNFMADKILACANNMANVTHKNQKILHMSVFISITRLVHGDGVVVESMEDRGHGSAMEGLEKVKVTEKYDCAICLQDFEVDSEGVRMLCLHLFHRTCMVNWLQRSRSCPLCRFQMPTNESE 205
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi03g0362 205 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 140 205 IPR013083 -
Glsi03g0362 205 Pfam Ring finger domain 154 196 IPR001841 -
Glsi03g0362 205 ProSiteProfiles Zinc finger RING-type profile. 155 196 IPR001841 -
Glsi03g0362 205 PANTHER E3 UBIQUITIN-PROTEIN LIGASE PRAJA 115 200 - -
Glsi03g0362 205 SMART ring_2 155 195 IPR001841 -
Glsi03g0362 205 SUPERFAMILY RING/U-box 145 201 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi03g0362 Glsi-ChrGlsi03 6035940 6036557 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi03g0362 139 205 C3H Transcription Factor Family AT1G68180 41.667 3.41e-13 64.3