Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi03g0352 ATGACCAACAGCACCGCCACCCCTATCTCCATCTTCTCTTTCTTCAGCATCACTCAGCTATCCCCTTACTTCATCTGCTTCATCCTCCTTATTCTTCTCTTCGAACAGATCTCGTACCTGAAGAAGAAACGCTCTGTTCCTGGTCCTTCTCTTGTGTTACCCTTCGTCGGCAACGCAATCTCATTGGTCCGAAAGCCCACCAAGTTCTGGGACGTCCAATCTGCTCTCGCCAAGTCATCCAACCTCGGCTTCTCCGCAAACTACATAATCGGAAACTTTATCCTCTTCATCCGCGACACTGAGCTCTCCCACAAGGTCTTCGCCAATGTCCGACCCGATGCGTTTCGTTTGGTGGGTCACCCGTTTGGGAAGAAGCTCTTCGGCGAGCACAACCTTATCTACATGATGGGTCAAGAGCACAAGGATCTCCGCCGTCGTATCGCACCCAACTTCACTCCCAAAGCCCTCTCTACCTACACCGTGTTGCAGCAGATTATTATTCTCAAGCACATCAAACTATGGGAGAAGCTCTCGTCGGAGAATGCTCCGAACCCGATTTCGCTCCGGCTTCTAGCCCGGGAAATGAACCTGGAAACTTCTCAGACCGTCTTCGTGGGCCCTTATTTGGGCCCCGAAGCCCGCAAACGGTTCAAACACGATTATAATCTGTTTAACGTTGGGGTCATGAAGTTGCCCATTGATCTCCCCGGCGCGGCGTTTCGAAACGCGAGGCTCGCCGTTGACCGGCTGGCCAAAACCCTAGGAACCTGTACGGAGCACAGCAAGGCGAGGATGGAGGAAGGGGAGGAGCCGTCGTGCTTGATCGATTACTGGATGCAGGACACACTGAGAGAGATCGCTGAAGCCAAGGCCGCCGGGAACCCTCCGCCGCGGTTCAGTAGCAACGCCGAGATCGGGGGCTACCTCTTCGATTTCCTCTTCGCGGCGCAGGATGCTTCGACGTCGTCCCTTCTATGGGCGGTCACGCTGCTCGACTCGCACCCCGAGGTTCTTGCGAAGATCAGGGCCGAGGTTTCCGGGATATGGTCGCCGGAGTATGATACTCTGATAACGGCGGAACAGTTGAGGGAGATGAAGTACACGCAGGCGGTGGCACGTGAGGTGGTGAGGTTCCGTCCGCCGGCGACGCTGGTCCCTCACATCGCTGCCGAGGATTTCCCATTGACGGAGTCGTACACGATCCCCAAAGGGTGTATTGTGTTCCCCTCGGCATATGAGTCGTCGTTCCAGGGGTTCACCGAACCGGACCGGTTCGACCCAGAACGGTTTTCTGAGGAAAGGCAAGAAGACCAGATATTCAAAAGGAACTTTTTGGCATTCGGAGCTGGGGCCCACCAGTGTGTGGGGCAGCGGTACGCTTTGAACCACTTGGTGCTGTTCATGGCGATGTTCGCCATGTTGATTGATTTCAAGAGGCACAGATCGGACGGCTGTGATGAGATCACCTACGTACCTACTATCTGCCCCAAGGACGATTGCAAGGTTTCAATGACGAGACGGTGCACACGGTATCCTTCATTCCCCGCTATTGAGTCGACGAAATGA 1566 0.5479 MTNSTATPISIFSFFSITQLSPYFICFILLILLFEQISYLKKKRSVPGPSLVLPFVGNAISLVRKPTKFWDVQSALAKSSNLGFSANYIIGNFILFIRDTELSHKVFANVRPDAFRLVGHPFGKKLFGEHNLIYMMGQEHKDLRRRIAPNFTPKALSTYTVLQQIIILKHIKLWEKLSSENAPNPISLRLLAREMNLETSQTVFVGPYLGPEARKRFKHDYNLFNVGVMKLPIDLPGAAFRNARLAVDRLAKTLGTCTEHSKARMEEGEEPSCLIDYWMQDTLREIAEAKAAGNPPPRFSSNAEIGGYLFDFLFAAQDASTSSLLWAVTLLDSHPEVLAKIRAEVSGIWSPEYDTLITAEQLREMKYTQAVAREVVRFRPPATLVPHIAAEDFPLTESYTIPKGCIVFPSAYESSFQGFTEPDRFDPERFSEERQEDQIFKRNFLAFGAGAHQCVGQRYALNHLVLFMAMFAMLIDFKRHRSDGCDEITYVPTICPKDDCKVSMTRRCTRYPSFPAIESTK 521
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi03g0352 521 FunFam Cytochrome P450 61 36 507 - -
Glsi03g0352 521 Gene3D Cytochrome P450 37 511 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi03g0352 521 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 447 456 IPR017972 GO:0005506|GO:0016705
Glsi03g0352 521 Pfam Cytochrome P450 47 471 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi03g0352 521 PRINTS E-class P450 group I signature 369 387 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi03g0352 521 PRINTS E-class P450 group I signature 454 477 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi03g0352 521 PRINTS E-class P450 group I signature 444 454 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi03g0352 521 PRINTS E-class P450 group I signature 324 350 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi03g0352 521 PRINTS E-class P450 group I signature 408 432 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi03g0352 521 PANTHER CYTOCHROME P450 26 46 470 - -
Glsi03g0352 521 SUPERFAMILY Cytochrome P450 39 507 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi03g0352 521 PRINTS P450 superfamily signature 454 465 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi03g0352 521 PRINTS P450 superfamily signature 315 332 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi03g0352 521 PRINTS P450 superfamily signature 445 454 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi03g0352 521 PRINTS P450 superfamily signature 370 381 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi03g0352 521 CDD CYP61_CYP710 83 500 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi03g0352 Glsi-ChrGlsi03 5843987 5845552 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi03g0352 11 514 Cytochrome P450 AT2G34500 68.056 0.0 723