Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi03g0338 ATGTTATTTCCCTGGGCTAAAAACTTCTTCCAGAAGTTCTGGCTAGATGAATTCCATATGGGAAGTTTTTCCCATAGCAGCTTTTTGTCTAATGATCTCCTCCCATCACTTGGAGCCCGAATCAACCACGAAACTAGACTTCGAAGATACATAATCTCCCCTTTTGATCCCTGCTATAGGGCTTGGGAGATGCTACTGGTGGTTCTAGTCATTTACTCAGCCTGGATTTGCCCGTTTGAGTTTGCCTTTCTGCCTTTCAAGAAAGACTCACTATTCATCATTGACAATATTGTCGATGGCTTCTTTGCCATTGACATCATTCTGACATTCTTTGTTGCATATCTGGATCGTCAGTCTTACCTCCTTGTTGATGATCCCAGGAGAATTGCAATCAGGTACATATCTACCTGGTTTATCTTTGATGTCTGCTCAACGGCACCTTTTCAGTCCATCAGCCTCCTCTTCACTAATCATAGCAGTGAGTTTGGCTTTGAACTTCTTAACATGCTTCGATTATGGCGTCTGAGACGAGTCAGCTCTCTGTTTGCCAGACTTGAGAAGGACATCCGCTTCAATTATTTCTGGACTAGATGCACAAAGCTCATTGCAGTAACCTTGTTTGCAGTACACTCTGCTGGATGCTTTTACTATCTAATTGCAGATAAATACCCAAATTCTAAAAGAACCTGGATTGGTGCAATGCACCCAAATTTTAAAGAAGAAAGTCTTTGGGACAGATATGTGACTGCAATATACTGGTCCATTGTCACACTTACCACTACTGGCTATGGGGATTTACATGCTGAAAACCCAATAGAGATGCTGTTTGATATCTTTTACATGCTGTTCAACTTGGGATTAACATCATATATCATTGGAAACATGACAAACCTTGTAGTCCACTGGACCAGCCACACCAGAAATTTTAGAGATACAGTCAGAGCAGCTTCAGAATTCTCATCAAGGAATCATTTGCCCGATCATCTACAAGAGCAAGTGTTGTCACACTTATGTCTGAGGTTTAAAACAGAAGGATTGAAGCAGCAAGAAACATTAAATGATCTGCCCAAGGCAATTCGTTCAAGCATTGCAAGCCATCTATTCTTTCCCATTGTGAAGGAGGTCTACCTCTTCCACGGAGTTTCCCGTGACTTCCTTTTCCAACTGGTTTCAGAAATGGAAGCAGAGTATTTTCCGCCCAAAGAAGACGTGATACTTCAAAATGAGGCTTCTACAGACCTTTACGTGCTGGTATCCGGGGGGGTGGATCTTATTGGCTACATGGATGGGCATGATCAAGTTTTCGGGAAGGCAATTGCTGGAGAAACATTTGGAGAAATTGGGGTTTTATACTACAGACCACAGCCTTTCACAGTTCGGACTAGGGAGCTTTCTCAAATCTTAAGACTCAATAGAACTTCATTAATGAATGCTGTACAAGCAAATCCAGAAGATGCACAAATTATGATGGATAATCTTTTCATGAGGTTAAAGGGACAAGAAGGCTCAGGATTTGAAAATCCACTAACAGATCCTAGATTGGTTCTTCATGAGAACCTTGATGGAGGAAAAACAAGAGAGAGCTCTTCTCATGCAAGTACAAACAATTCGCTCCGGGATTTAATAATCCAGGAAGGAAGGTATAGAGAATTCACACAAACAGATGTTAGATTGCATAAGGTGACAAGTGAGGATGGTGAAAGAGATATTCATGCTGCAACACTCAAAGGGCATCCAGAGAGAGTTGAAATTTTGCTTGCAAGAGATGCAAATGAAAAGAATCCAAATGCCATAGGATGGACACCAAAAACTCTGGTAGAGCAACAAGATAACAAGAGCACTTCTAATCTCTTCATGAGTTATGAAAATACGGAGAAATTAGATGAATATAGAAAAGAGTTTATGGAGCCAGAAATTCTTAAGCACGCCAGGAATGACACAACCAGAAACAGAAGACATGATGATCCAAGATCTATCAACTTCCATTCAGAGAATGTATACAGAAACTCCTATTCAAGTAATCCTAACTGTCCAATTAATAAAGAAGTGGCAAGATTCATAAAAAAAAAGAGAGTTACGATACACTTGCTAGGCCAACACAGGAGTACCTCACGGGGACAGCACGGGAAGTTGATACTTCTACCTGGTTCGATAGAAGAGCTGCTCAAGATTGCTGATGAAAAGTTTGGAGGCTCAAAACCAACAAAAGTTGTTAATACTGAGAATGCCGAGATAGATGACATAGGTGTCATTTGTGATGGCGATCACCTCTTTCTCCATTGCAGTAATATTACCTAA 2298 0.4082 MLFPWAKNFFQKFWLDEFHMGSFSHSSFLSNDLLPSLGARINHETRLRRYIISPFDPCYRAWEMLLVVLVIYSAWICPFEFAFLPFKKDSLFIIDNIVDGFFAIDIILTFFVAYLDRQSYLLVDDPRRIAIRYISTWFIFDVCSTAPFQSISLLFTNHSSEFGFELLNMLRLWRLRRVSSLFARLEKDIRFNYFWTRCTKLIAVTLFAVHSAGCFYYLIADKYPNSKRTWIGAMHPNFKEESLWDRYVTAIYWSIVTLTTTGYGDLHAENPIEMLFDIFYMLFNLGLTSYIIGNMTNLVVHWTSHTRNFRDTVRAASEFSSRNHLPDHLQEQVLSHLCLRFKTEGLKQQETLNDLPKAIRSSIASHLFFPIVKEVYLFHGVSRDFLFQLVSEMEAEYFPPKEDVILQNEASTDLYVLVSGGVDLIGYMDGHDQVFGKAIAGETFGEIGVLYYRPQPFTVRTRELSQILRLNRTSLMNAVQANPEDAQIMMDNLFMRLKGQEGSGFENPLTDPRLVLHENLDGGKTRESSSHASTNNSLRDLIIQEGRYREFTQTDVRLHKVTSEDGERDIHAATLKGHPERVEILLARDANEKNPNAIGWTPKTLVEQQDNKSTSNLFMSYENTEKLDEYRKEFMEPEILKHARNDTTRNRRHDDPRSINFHSENVYRNSYSSNPNCPINKEVARFIKKKRVTIHLLGQHRSTSRGQHGKLILLPGSIEELLKIADEKFGGSKPTKVVNTENAEIDDIGVICDGDHLFLHCSNIT 765
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi03g0338 765 Pfam Cyclic nucleotide-binding domain 397 481 IPR000595 -
Glsi03g0338 765 FunFam Potassium channel KAT3 61 301 - -
Glsi03g0338 765 Gene3D Jelly Rolls 370 502 IPR014710 -
Glsi03g0338 765 SMART cnmp_10 377 494 IPR000595 -
Glsi03g0338 765 Gene3D - 60 300 - -
Glsi03g0338 765 PANTHER POTASSIUM CHANNEL AKT1 25 501 IPR045319 GO:0005249|GO:0006813
Glsi03g0338 765 Gene3D Helix hairpin bin 301 367 - -
Glsi03g0338 765 Pfam Ion transport protein 60 306 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Glsi03g0338 765 ProSiteProfiles KHA domain profile. 691 765 IPR021789 -
Glsi03g0338 765 SUPERFAMILY cAMP-binding domain-like 304 497 IPR018490 -
Glsi03g0338 765 ProSiteProfiles Ankyrin repeat profile. 565 597 IPR002110 GO:0005515
Glsi03g0338 765 SUPERFAMILY Voltage-gated potassium channels 54 299 - -
Glsi03g0338 765 CDD CAP_ED 377 490 IPR000595 -
Glsi03g0338 765 SUPERFAMILY Ankyrin repeat 562 621 IPR036770 -
Glsi03g0338 765 ProSiteProfiles cAMP/cGMP binding motif profile. 377 496 IPR000595 -
Glsi03g0338 765 Pfam KHA, dimerisation domain of potassium ion channel 690 759 IPR021789 -
Glsi03g0338 765 PRINTS EAG/ELK/ERG potassium channel family signature 247 264 IPR003938 GO:0005249|GO:0006813|GO:0016020
Glsi03g0338 765 PRINTS EAG/ELK/ERG potassium channel family signature 95 105 IPR003938 GO:0005249|GO:0006813|GO:0016020
Glsi03g0338 765 PRINTS EAG/ELK/ERG potassium channel family signature 106 115 IPR003938 GO:0005249|GO:0006813|GO:0016020
Glsi03g0338 765 PRINTS EAG/ELK/ERG potassium channel family signature 72 79 IPR003938 GO:0005249|GO:0006813|GO:0016020
Glsi03g0338 765 PRINTS EAG/ELK/ERG potassium channel family signature 273 284 IPR003938 GO:0005249|GO:0006813|GO:0016020
Glsi03g0338 765 PRINTS EAG/ELK/ERG potassium channel family signature 291 300 IPR003938 GO:0005249|GO:0006813|GO:0016020
Glsi03g0338 765 FunFam Potassium channel KAT2 365 501 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi03g0338 Glsi-ChrGlsi03 5552826 5557007 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi03g0338 1 759 Ion Channels AT4G18290 59.684 0.0 855