Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi03g0304 ATGAGGAGGAATTGCAACTTGGAACTTCGGCTTTTTCCGTCTTCCGATTCTGACCACCGCCATGACCAGCAGCCCATAATGCAAGCAGCTAGTGAGAGTCCACTACAACTATATCAGCAGCAGCAGCAGCAGCAACAACAAAAGCTTACAATTTTCTATAATGGGAAGATTTGCGTTTCTGATGTTACAGAGCTTCAGGCTAGATCGATCTTGATGGTTGCAAATAAAGAAATGGAAGAAAAAGTGAGAACACCAAATGGGTCAGCGCCAACTTCACCAACACTGCCATTGTATAGCCCTAGCACTGGCCTTTCCATGAAAAAATCTCTGCAACGTTTCCTTCAGAAGAGAAAGAATCGGATCCAAGAAGCATCCCCATACCATCACTAG 390 0.4462 MRRNCNLELRLFPSSDSDHRHDQQPIMQAASESPLQLYQQQQQQQQQKLTIFYNGKICVSDVTELQARSILMVANKEMEEKVRTPNGSAPTSPTLPLYSPSTGLSMKKSLQRFLQKRKNRIQEASPYHH 129
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi03g0304 129 SMART tify_2 42 76 IPR010399 -
Glsi03g0304 129 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 25 127 IPR040390 -
Glsi03g0304 129 Pfam tify domain 43 75 IPR010399 -
Glsi03g0304 129 ProSiteProfiles Tify domain profile. 42 76 IPR010399 -
Glsi03g0304 129 MobiDBLite consensus disorder prediction 85 103 - -
Glsi03g0304 129 Pfam Jas motif 107 127 IPR018467 -
Glsi03g0304 129 MobiDBLite consensus disorder prediction 81 103 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi03g0304 Glsi-ChrGlsi03 4529177 4530416 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi03g0304 1 128 Tify Gene Family AT1G30135 48.120 3.04e-32 108
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Tify Glsi03g0304 tify 4.3e-13 No_clan