Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi03g0294 ATGGAGGAGGATGGAATTGAAGCGCAAGCATGTAAATTCCCTAGAGTTGGAAATGGTAGAAACGACTCCAACAAGATAGGTGAGGAAGAAGATGGAGAGCTAAGAAGAAGAGGGGGAGGAAGCGATGGAAGCACGAATCGATTTCATAGTTGGAGCCACCACTCTTCAAGAATCATTAGGGTTTCTCGAGCATCTGGTGGGAAAGATCGGCACAGCAAGGTCATGACTTCAAAGGGCTTAAGAGACCGAAGGGTTCGGCTCTCTGTAAGCACAGCTATCCAGTTCTATGATCTTCAAGATCGCCTGGGTTATGACCAACCCAGTAAAGCTGTGGAATGGCTAATCAAAGCAGCTTCTGATGCCATAGCTGAGCTTCCTTCTCTGAACGGCGCTTTTCCTGAAACCCCAAAGCAACCAAGCGATGAGAAGAGGGGAAGTGTTGGGGGAACAGAACAAGAACAAGGGTTTGATGATTCAGCTGATGCAGAGCTAGATGTTGATGAGGGAAATTACCAGCAGAACCAAAGCCAGAACCTTTCCAGGTCCAAATCTGCTTGTAGTAGCACTTCGGAGACTAGCAAAGGCTCTGGCTTGTCTCTCTCGCGGCCTGACATGCGTGTGAACCGTGTGAAGGCACGAGAGAGGGCGAGGGAGAGAGCAGCAAAGGAGAAGGAGAAGGAGAAAGAGAATAACGACTCTTCTCGCATTGCCCATCATCATCACCACCAGAATGTGAACAACCCCATTTCTCAAACTGCGTCTTTTACTGAGCTTCTCACGGGTGGAATTAACGCTAGTGCTCATACTTCCGCTTCCAGTGAACTCAACCGAAATCATCGTGGCGAAGATGATGATGAGGCTAATATCTTCAACAAAGCATCAGCAAGACAGCAATGGTGTTCAACACCCATGATGGACTACTTCAACTCTGGGCTTCTGGGACCTTCGTCTTCAAGAACCCATCATCAATCTTCTTCTGGGTTCCCAGAACAAATCCAATTGGGAAATTTGAATTCCCTCCCTCAGGCGATGCCGATTTCACCATTTACGGTCCAGGGCGATCAAAATCACTCAGATCAGCTTCAGCATTACTCTTTCATTCCTGACCATCTTATGCCAACTGTGGTTACTTCGCAGCCTAGCGGAAGCGATTACAATCTCAACTTCACTATCTCTTCCGGCCTTCCTGGTTTCATTAGTAGGGGGACCCTTCAGTCCAATTCTCCGTCTCTTCTGCCTCAACATCTGCCGAGGTTTTCACCATTAGACGGATCCAATGTACCTTTCTTCATGGGAGCTGCTACTGCTGCGGCGGGTTCATCTGCTCCAGCCATGGAGAATCACCACCACCATCAGTTCTCACCTGGATTTGATGGCCGCTTGCAACTCTGCTATGGCGACGGAAGCCGGCATTCAGACCAGAAGGGGAAAGGGAAGAACTGA 1443 0.4879 MEEDGIEAQACKFPRVGNGRNDSNKIGEEEDGELRRRGGGSDGSTNRFHSWSHHSSRIIRVSRASGGKDRHSKVMTSKGLRDRRVRLSVSTAIQFYDLQDRLGYDQPSKAVEWLIKAASDAIAELPSLNGAFPETPKQPSDEKRGSVGGTEQEQGFDDSADAELDVDEGNYQQNQSQNLSRSKSACSSTSETSKGSGLSLSRPDMRVNRVKARERARERAAKEKEKEKENNDSSRIAHHHHHQNVNNPISQTASFTELLTGGINASAHTSASSELNRNHRGEDDDEANIFNKASARQQWCSTPMMDYFNSGLLGPSSSRTHHQSSSGFPEQIQLGNLNSLPQAMPISPFTVQGDQNHSDQLQHYSFIPDHLMPTVVTSQPSGSDYNLNFTISSGLPGFISRGTLQSNSPSLLPQHLPRFSPLDGSNVPFFMGAATAAAGSSAPAMENHHHHQFSPGFDGRLQLCYGDGSRHSDQKGKGKN 480
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi03g0294 480 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 40 337 IPR005333 GO:0003700
Glsi03g0294 480 Coils Coil 210 231 - -
Glsi03g0294 480 MobiDBLite consensus disorder prediction 170 249 - -
Glsi03g0294 480 ProSiteProfiles R domain profile. 206 224 IPR017888 -
Glsi03g0294 480 ProSiteProfiles TCP domain profile. 67 125 IPR017887 -
Glsi03g0294 480 MobiDBLite consensus disorder prediction 1 55 - -
Glsi03g0294 480 MobiDBLite consensus disorder prediction 170 199 - -
Glsi03g0294 480 Pfam TCP family transcription factor 66 226 IPR017887 -
Glsi03g0294 480 MobiDBLite consensus disorder prediction 128 157 - -
Glsi03g0294 480 MobiDBLite consensus disorder prediction 206 239 - -
Glsi03g0294 480 MobiDBLite consensus disorder prediction 22 42 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi03g0294 Glsi-ChrGlsi03 4379641 4381083 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi03g0294 46 480 TCP Transcription Factor Family AT4G18390 40.959 1.23e-71 229
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Glsi03g0294 TCP 5.6e-42 No_clan