Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi03g0229 ATGGTATCTTCTTTTCTTCTCTATCAGCCTCTGCACTGCTTCGTCTCCAACACCCAGCTGAAAGGTTTGTTCCATGGCTTGTTGTGGCGACCCAGTTTCTCATTTAGCTGTGATGCCCAAAACAAAGTTCGACCCATAAAAGCTTCTGTTGATTCACCCCCATTTCCGTTGTTTCAACCAGCCAAAGATGAAGAGCCGCTGTCTGAGTTGGAGCCTGCAGACCCTGATTTCTACAAGATAGGTTACGTACGAAGCATGCGAGCTTATGGAATTGAATTTAAGGAAGGGCCAAATGGATTTGGTGTGTATGCTTCCAAAGATGTAGAACCTCTTCGCCGAGCCAGGGTTATTATGGAAATTCCTCTTGAATTGATGTTAACCATAAGGCAGAAGCTCCCATGGATGTTTTTCCCTGATATAATTCCAATAGGTCACCCAATATTTGATATTATCAACTCGACAAATCCAGAGACAGATTGGGACCTAAGGTTGGCTTGCCTCCTCTTATTTGCATTTGACTGTGAAGACAGCTTTTGGCAGTTGTATGGTGACTTCTTACCAAGTGCTGATGAGTGCACTAGCTTACTTTTAGCTACGGAGGAGGAACTTTTTGAGCTACAGGATCCCAATCTTGCTTCTACCATAAGAAACCAGCAACATCGAGCCTTAGAATTTTGGGAGAAGAACTGGCACAGTGGTGTACCGCTTAAAATAAAGCGTCTTGCTCGGGATCCTCAAAGGTTCATTTGGGCAGTGAGTATTGCACAATCACGATGCATTAACATGCAAATGAGGATTGGTGCACTAAATCAAGATGCAAATATGCTGATTCCTTATGCCGACATGCTGAACCATTCATTTAAGCCAAATTGTTTTTTCCATTGGCGTTTTAAAGATCGGATGCTTGAGGTGCTTATAAATGCTGGACAGCGTATTAGAAAAGGAGATGAGATGACAGTCAACTACATGAGCAGACAGAAGAATGACATATTGATGCAAAGATATGGATTTTCATCATCTGTGAATCCCTGGGATGTGATCAAATTCTCAGGAAACGCACGTATTCATTTGGATTCCTTCTTGTCAGTTTTCAATATATCTGGCCTTCCAGAAGAGTATTACCATAACAGCCGCCTATCTAACCCTGGAGATACTTTTGTTGATGGAGCAGTTATAGCGGCAGCACGAACATTGCCAACCTGGTCAGATGGGTATGTACCTCCAATCCCTAGTGCGGAAAGAAAGGCTGCAAAGGAGTTACAACAAGAATGCCAACGGATGCTTGCGGAATTTCCTACAACCTCTAAGCAAGACCAGAGATGGCTGGATTCTTTGCCCCAAGCTACAACAAGGACACTTGAAGCTGCAATTAAGTATAGATTGCACCGGAAATTGTTCATCGAAAAAGTTATCCAAGCATTGGACATCTATCAAGAGCGGTTACTGTTCTGA 1452 0.4304 MVSSFLLYQPLHCFVSNTQLKGLFHGLLWRPSFSFSCDAQNKVRPIKASVDSPPFPLFQPAKDEEPLSELEPADPDFYKIGYVRSMRAYGIEFKEGPNGFGVYASKDVEPLRRARVIMEIPLELMLTIRQKLPWMFFPDIIPIGHPIFDIINSTNPETDWDLRLACLLLFAFDCEDSFWQLYGDFLPSADECTSLLLATEEELFELQDPNLASTIRNQQHRALEFWEKNWHSGVPLKIKRLARDPQRFIWAVSIAQSRCINMQMRIGALNQDANMLIPYADMLNHSFKPNCFFHWRFKDRMLEVLINAGQRIRKGDEMTVNYMSRQKNDILMQRYGFSSSVNPWDVIKFSGNARIHLDSFLSVFNISGLPEEYYHNSRLSNPGDTFVDGAVIAAARTLPTWSDGYVPPIPSAERKAAKELQQECQRMLAEFPTTSKQDQRWLDSLPQATTRTLEAAIKYRLHRKLFIEKVIQALDIYQERLLF 483
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi03g0229 483 CDD SET_LSMT 90 337 - -
Glsi03g0229 483 FunFam Protein PLASTID TRANSCRIPTIONALLY ACTIVE 14 83 337 - -
Glsi03g0229 483 ProSiteProfiles SET domain profile. 89 323 IPR001214 GO:0005515
Glsi03g0229 483 SUPERFAMILY SET domain 98 337 IPR046341 -
Glsi03g0229 483 Pfam SET domain 99 322 IPR001214 GO:0005515
Glsi03g0229 483 Gene3D set domain protein methyltransferase, domain 1 83 337 - -
Glsi03g0229 483 PANTHER UNCHARACTERIZED PUTATIVE METHYLTRANSFERASE 67 450 - -
Glsi03g0229 483 SUPERFAMILY RuBisCo LSMT C-terminal, substrate-binding domain 334 480 IPR036464 -
Glsi03g0229 483 Pfam Rubisco LSMT substrate-binding 412 464 IPR015353 -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Glsi03g0229 SET 1.7e-20 No_clan