Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi03g0203 ATGGTTAAGGGACGCCAAGGAGAGCGTGTAAGACTTTACGTGAGAGGCACAATCCTTGGATACAAGAGATCCAAGTCAAACCAGTACCCAAACACATCTCTTATCCAAATCGAGGGAGTGAACACTAAGGAAGAGGTAGCATGGTATTGCGGTAAGAGAATGGCATATATTTACAAGGCCAAGGTGAAGAAGAATGGAAGCCATTATCGCTGCATTTGGGGTAAGGTTACCAGGCCTCACGGTAACAGTGGTGTTGTTCGAGCAAAATTCAAATCAAATCTTCCACCCAGATCAATGGGAGCTAGGGTTAGAGTATTCATGTACCCAATCTCTGGATATGATGCCTAG 348 0.4483 MVKGRQGERVRLYVRGTILGYKRSKSNQYPNTSLIQIEGVNTKEEVAWYCGKRMAYIYKAKVKKNGSHYRCIWGKVTRPHGNSGVVRAKFKSNLPPRSMGARVRVFMYPISGYDA 115
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi03g0203 115 FunFam 60S ribosomal protein L35a 7 111 - -
Glsi03g0203 115 SUPERFAMILY Translation proteins 12 106 IPR009000 -
Glsi03g0203 115 Pfam Ribosomal protein L35Ae 12 106 IPR001780 GO:0003735|GO:0005840|GO:0006412
Glsi03g0203 115 Hamap 50S ribosomal protein L35Ae [rpl35ae]. 14 106 IPR001780 GO:0003735|GO:0005840|GO:0006412
Glsi03g0203 115 PANTHER 60S RIBOSOMAL PROTEIN L35A 2 110 IPR001780 GO:0003735|GO:0005840|GO:0006412
Glsi03g0203 115 Gene3D translation elongation factor selb, chain A, domain 4 6 111 IPR038661 -
Glsi03g0203 115 ProSitePatterns Ribosomal protein L35Ae signature. 74 95 IPR018266 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi03g0203 Glsi-ChrGlsi03 3199285 3201615 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi03g0203 1 109 Cytoplasmic Ribosomal Protein Gene Family AT1G74270 92.661 4.42e-73 211