Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi03g0200 ATGGAAAAGAATCATCATCGTCAACCTTCTGATTTCTTCTACGTATTCTCCGAAACTCCACCCACAAATGAAAAACCAGTCTTGAGCCTTCAATATCCACAAGAACACCATAAAAAGGTCCTGCAGGATGAATCATCATCATCATCTGAAATAGTTTCTACTGAATTGTCTCTTTCTTCTTCTACCTTCTCCTCCTCCTCCCAGACCAAAAAAACCCGTCAATGTTTTGGTAATTCCAAGGAGAAAGCAACATCTAAACCAAACCCTTCTTCCAAGATAGAGAATAAAAGGCAGTGGGACTGCACAACCACACTGAAGCTCTACGATGATCCATGGAAGATTAAGAAAGTTCTAACGGCGAGTGATCTTGGAAAGCTAAATAGGCTCTTGCTGGGTTCAGATTTAATGGAGAACTTGATGCTACCTGCTGTGTTGGGAGAATCTTCTGAGGTTCATGGACTTATGGGAATCCCAGTTTGGGTGTGGGATGTGGACACCAAGTCCATGCACCACCTGGTTCTGAAGAGATGGGCTTCCTTCAAGAACTACGTTCTGATCGGGAATTGGAGCCAAGACTTTGTTAAGAGAAGGGGTTTGAAGAAAGGAGATGAAATAGGGCTCCACTGGGATTCTTACAGACACTGCTTCAACTTCTCTCTTCTTAAGCGAGCCGTGCCTGCAGATTGA 687 0.4367 MEKNHHRQPSDFFYVFSETPPTNEKPVLSLQYPQEHHKKVLQDESSSSSEIVSTELSLSSSTFSSSSQTKKTRQCFGNSKEKATSKPNPSSKIENKRQWDCTTTLKLYDDPWKIKKVLTASDLGKLNRLLLGSDLMENLMLPAVLGESSEVHGLMGIPVWVWDVDTKSMHHLVLKRWASFKNYVLIGNWSQDFVKRRGLKKGDEIGLHWDSYRHCFNFSLLKRAVPAD 228
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi03g0200 228 MobiDBLite consensus disorder prediction 1 26 - -
Glsi03g0200 228 SUPERFAMILY DNA-binding pseudobarrel domain 110 223 IPR015300 -
Glsi03g0200 228 PANTHER TRANSCRIPTION FACTOR B3-DOMAIN FAMILY-RELATED 66 223 - -
Glsi03g0200 228 Gene3D - 111 223 IPR015300 -
Glsi03g0200 228 CDD B3_DNA 112 222 IPR003340 GO:0003677
Glsi03g0200 228 MobiDBLite consensus disorder prediction 62 95 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi03g0200 Glsi-ChrGlsi03 3138487 3139173 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi03g0200 36 205 RAV Transcription Factor Family AT1G68840 29.379 6.33e-06 44.3