Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi03g0198 ATGGAAAAGAATCATCATCGCCAAGCTTTGGATTTCTTCTACGTATTCTTTGAAAATCCATCCAGAAATGAAGAGCCATTCTTGAGCCTTCAATACTCACAAGAACAACCAAAAAAAGTCCGGCAGGATGAAGCATCATCATCATCAGCAATAGTTTCTACTGAATTATCTCTTTCTCCTTCTACTTCCTCCTCCTCCTCCGCCTCCTCTCAAACCAAAAAAACCCTGCAATGTTTTGGTAATTCCAGGAAGAAATCAACATCCAAGCCAAACCCTTCTTCCAAGACAGGAAGGAGTAGTACTAAGAGATCATTCTGGGGCTACTCAACCACGCTGAAGCTCTATGATGATCCATGGAAGATCAAGAAAGTTCTAACAGCAAGTGATCTTGGGAAGCTAAATAGGCTCTTGCTAGGTTCAGATTTGATGGAAAACTTGATGCTACCTGCTGTGTTGGGAGAATTTTTTCCTGAGGTTAATGAAAATATGGGAATCCCAGTTTGGGTGCGGGATGTGGACACCATGTCCATGCACCAACTGGTTCTAAAGAAATGGGCTTCTTTTAAGAACTACGTTCTGATTGGGGATTGGAGCCAAGACTTTGTTAAGAGAAGGGGTTTGAAGAAAGGAGATGAAATTGGGCTCCACTGGGATTCTTACAAACACTGCTTCAACTTCTCCCTTCTTAAGGCAGCTATGCCCGCAGATTAA 711 0.4248 MEKNHHRQALDFFYVFFENPSRNEEPFLSLQYSQEQPKKVRQDEASSSSAIVSTELSLSPSTSSSSSASSQTKKTLQCFGNSRKKSTSKPNPSSKTGRSSTKRSFWGYSTTLKLYDDPWKIKKVLTASDLGKLNRLLLGSDLMENLMLPAVLGEFFPEVNENMGIPVWVRDVDTMSMHQLVLKKWASFKNYVLIGDWSQDFVKRRGLKKGDEIGLHWDSYKHCFNFSLLKAAMPAD 236
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi03g0198 236 PANTHER TRANSCRIPTION FACTOR B3-DOMAIN FAMILY-RELATED 80 231 - -
Glsi03g0198 236 MobiDBLite consensus disorder prediction 28 102 - -
Glsi03g0198 236 CDD B3_DNA 119 230 IPR003340 GO:0003677
Glsi03g0198 236 MobiDBLite consensus disorder prediction 43 102 - -
Glsi03g0198 236 Gene3D - 118 230 IPR015300 -
Glsi03g0198 236 SUPERFAMILY DNA-binding pseudobarrel domain 117 227 IPR015300 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi03g0198 Glsi-ChrGlsi03 3098891 3099601 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi03g0198 123 216 RAV Transcription Factor Family AT4G01500 34.043 2.49e-06 45.8