Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi03g0195 ATGGACGGAAACAGTACGGCAACTTCAGCAATTTCAGCAGAAACTGCGCCGGAAGATATCATAGTTTGCTATTCACCAACTATGATAACATCATTTCGTGTATGGCAAGGGAACAACCCTTTAAATTATTCCCTGCCTCTCTTCGTCTTGCAATTAACGTTAGTTGTTGCTGCCACACGTTTTTTCGTTGTCATCCTCAAACCCTTTCGCCAACCTCGTGTGATAGCTGAAATCATGGGTGGATTGTTATTAGGACCATCAGTGCTTGGACGAAATGAAACATTTGCAAAACAAGTTTTCCCACTAAGAAGTGTGGCGGTAATTGAGGCAATGGCAAACATAGGCCTTATTTACTTCCTCTTCTTAGTTGGCCTAGAAATGGACATTTCAGTCGTCAAACGCACGGGAAGAAAAGCTATCTTCATAGCCATTGCTGGCATGGCCGCGCCCTTCGCCGTTGGAGCCGGCTTCTCCCTCCTTTTCCAGAACAACAAAGACCCAAACATGAGCCATGCCACCTTCATCCTCTTTCTCGGTGTTGCCCTCTCCGTCACAGCCTTCCCGGTGCTAGCTCGCATCCTTGCTGAGCTCAAACTCTTCAACACTGAACTCGGCCGCCTCGCCCTCTCAACTTCCCTAATCAATGATGTGTGTGCTTGGGTTTTGTTAGTTCTAGCCATGTCGATGGCTGAGTCTAGAGCCACATCTTGGGCTGCCTTTGGTGTTATACTATCAAATTTCACCTTTGTTGTTATATGTTTTTGTGTGGTTCGTCCAGCTATTTCTTGTATGCTTAGGACAACCCCAGATGGAGAATCCTTTACTGACCTACAAATTTGTGTTATACTCTCTGGGGTTATGGTCTCAAGTTTTGTGACAGATGCCATGGGGTCACATGCTATTTTTGGAGCTTATGTTTATGGGTTAGCTATTCCAAATGGTCCTATTGTGGTTGTTCTTGTAGAGAAACTTGAGGACTTTGTTTCAGGGCTTTTGCTCCCTCTATTTTTTGCTATTAGTGGGCTTAAGACTAATATCACAGTCATTAATGGAATCCGTAAATGGGCAAGTTTATTCTTGGTGATTCCTCTTGCTTATTGTGGCAAGGTCTTGGGGACTCTTCTTGTTTCACTCTCTTTCCAGATTCCAGCTCATGATGGTGTTATTCTTGGTTTGCTCATGAACACTAAAGGCCTTACTGAAATTATTGTGCTCAATGTTGCAAAGGACCAGAAGGTATTGGGGGACGAAATATTTGCAATGATGGTGATTATAACTGTGATAATGACAGGGCTCATAGCACCCATTGTAACAGCAATTTATAAGCCAACAAGAAGGCTCATACCCTCCAAGAGGAGGACAATTCAAGGGACAAGACTTGATTCAGAGTTAAGAATAATGGTGTGTGTCCACAACATAAGAAATGTCCCAACCATAATAAACCTCCTTCATGCATCCCACCCTACAAAGAAGTCTCCCTTGTGTATCTTTGCCCTCCACCTAGTTGAGCTCACTGGTAGGGTTTCGGCCATGCTCATAGTCCATGCTACTCGAAAATCTGGCCGGGCGACCCGCAACCAAACACAAACACAAACTGATCACATCATCAATGCATTTGAGAGCTTTGAAGAGAATGAAGATCATGTTTCGATCCACCCTTTAACTGTTGTTTCCCCTTATTCCACTATGCATGAGGATATAAACAGTTTGGCAGAGGACAAAAGGGTTTCTGTGATAATCATCCCTTTCCATAAGCAACAAACAGTTGATGGAGGAATGCATGACACAAACCCAGCATTTAGATTGGTGAACCAGAATTTACTAGAGGACTCTCCTTGCTCAGTGGTTGTGTTCTTTGGAGGACCAGATGACAGGGAGGCACTAGCTTATGCATGGAGGATGATAGAGCACCCAGGAGTTTCTCTCACAGTGACTCACTTTATTCCAGGCCAAGAAGCAATCAAAGCTCAATCTTCAAACCAGTTCAAGAGAGATCTAAAAGATGAAAAGACATTGAATATATATAGTGGGAGGGAGAAAATACTGAATGAAGAGTTTATAAATGAGTTCAAAAGGAAGACTGCCAATGTTAAGTCAGTGGTTTATATGGAGAAAGTTGTCAACAATGGGGAAGAAACAGTAGCAGCATTAAGGTCAATGAAAAATGGGTATGATTTGTTCATAATTGGGAAAGATCAAGGGGAGGTTTCACCTCTAACCGCTGGGTTCGATGATTGGAGTGAGTGCCCAGAGTTGGGTGCAATTGGGGATTTGTTAGCTTCATCTGACTTTGGAACTACAGCTTCAGTGTTGGTGATGCAGCAATGTATTGGGATGAGGCTACGAGGGGACGAGATTAGGGTTACTGAAAATCCAAGGCAAGCAAGTGATTACGCCAACATCATTCAGCATTTGGGAAGTAGATATACATTATCAACAAGGGCAAAATCAGTTATATTTGATCATAGCCTTGGGTAG 2478 0.4322 MDGNSTATSAISAETAPEDIIVCYSPTMITSFRVWQGNNPLNYSLPLFVLQLTLVVAATRFFVVILKPFRQPRVIAEIMGGLLLGPSVLGRNETFAKQVFPLRSVAVIEAMANIGLIYFLFLVGLEMDISVVKRTGRKAIFIAIAGMAAPFAVGAGFSLLFQNNKDPNMSHATFILFLGVALSVTAFPVLARILAELKLFNTELGRLALSTSLINDVCAWVLLVLAMSMAESRATSWAAFGVILSNFTFVVICFCVVRPAISCMLRTTPDGESFTDLQICVILSGVMVSSFVTDAMGSHAIFGAYVYGLAIPNGPIVVVLVEKLEDFVSGLLLPLFFAISGLKTNITVINGIRKWASLFLVIPLAYCGKVLGTLLVSLSFQIPAHDGVILGLLMNTKGLTEIIVLNVAKDQKVLGDEIFAMMVIITVIMTGLIAPIVTAIYKPTRRLIPSKRRTIQGTRLDSELRIMVCVHNIRNVPTIINLLHASHPTKKSPLCIFALHLVELTGRVSAMLIVHATRKSGRATRNQTQTQTDHIINAFESFEENEDHVSIHPLTVVSPYSTMHEDINSLAEDKRVSVIIIPFHKQQTVDGGMHDTNPAFRLVNQNLLEDSPCSVVVFFGGPDDREALAYAWRMIEHPGVSLTVTHFIPGQEAIKAQSSNQFKRDLKDEKTLNIYSGREKILNEEFINEFKRKTANVKSVVYMEKVVNNGEETVAALRSMKNGYDLFIIGKDQGEVSPLTAGFDDWSECPELGAIGDLLASSDFGTTASVLVMQQCIGMRLRGDEIRVTENPRQASDYANIIQHLGSRYTLSTRAKSVIFDHSLG 825
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi03g0195 825 Pfam Sodium/hydrogen exchanger family 55 439 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
Glsi03g0195 825 FunFam Cation/H(+) antiporter 15 47 448 - -
Glsi03g0195 825 Gene3D - 47 447 IPR038770 -
Glsi03g0195 825 PANTHER CATION/H + ANTIPORTER 22 775 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi03g0195 Glsi-ChrGlsi03 3056135 3061385 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi03g0195 10 797 Antiporter Super Family AT2G13620 60.640 0.0 977