Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi03g0190 ATGAGAAGCAAAAGTGAAGGGACATTGAAGAGAAGAACAACAGGAGGAGCAAAGACTCCTGGTGGCGCCACGTGGCAGAATAGGAGTGGTAGAGTACATTGGGGTTCAACGAGAACAGCTACAACAACAACAACGACATCAACACCACCCCTTCTCTCTCTCTCTCTCCTGCCATGTCAGAGCGTAACCCCGTCCCATGGGTATGACCCCGGCGAATCCGTATTTGTAGAAAACAAATCATCAACAAGTAAAATGATTAATAGGAATTGGGTTTTAAAGCGCAAGCGGAGAAAGCTTTCGCTTGAGCAATCCAATGGTAAAGTTGACAATTCAGTAGCTTCTGAATCTTCTAGGAATGCCTCAGCTAAACATCCACTAAAGACTGAAGTAGCTACTGGTCAATTTTCCTCTAAGAAGAAAGGAAATGATGGGTATTTCTATGAATGTGTGGTTTGTGATCTTGGTGGCAACTTATTGTGCTGTGATAGCTGTCCTCGCACTTATCATTTACAGTGTCTTTCTCCACCTCTTAAGCGCATCCCTATGGGAAAGTGGCAATGTCCAAGCTGCTCTCAAGGAAATGATCAACTGAAGCCCATAAACCACCTGGATTCAATTTCAAAACGAGCGAGGACAAAATCTGTCGCTGCAAAATCAAAAAATGGAGTTAGTTCACTTAATAAGGATAAGGTTTCTCGGATTTTTGGAAGTACGCTTGTATCAAAGAAAAGGTCTTCCAGCAAGGGAAAATCTATTTCAACTTCGGGAGTCAAATTTTTAGGAAAGAAAACATTGTCTTCTCCAGTAGACGTAACCTTTAGCAACAAGCCAAGGGATCCATCTCTTGGGAGTTCCATGGAGGGAACTTCATCATGTGCAGATGCTGACGAAGAAAAGAAATCTAATATGCCCCTGACTGTCCTCCCTATGGACAGGAAGTCAACCTCAACTGTTGACGAAGTTTTGTCAACCTCTAAAGTTACTGACTTAGAGGCAGATGATGCACGTATGGAGGGGAAGCCTGATTTATCTTGTAATGAAATACCTTTAAGAAAAACACTTGTTCTTGCAGTTGCTGCTGCTGGAGGGGAAGTGAGAAAAAGGAAGCACAAAGTATCTGTTAATTCCAGTCAAAAGAAGTGTAAGACTGAAAAGGGAAAATCTACTGTCAATACTTCTACAAAGTGCAAATCTGGAAATAATAAAGTGCACAAGAAGCAGAAGTCTGTAAACCATAGTATTTCTGCATCTTTATCAAAAGAGGATGTTGGAACCAAGAGTTCTGATGTTGAGCAGAAAGATGAGAAGTTTCCTCAGGTAATGAAAAACACAACACGAGAGTTCGATAAGGCAGCAAGCCATGTGGATGAAACTCTTATGCATGAAGATTGTGCTGTTGTTGAATCTCTGCAGGTTGATCGGGTTCTAGGGTGTCGAGTTCAAGGTGAGAACATAAACTCATCTCGAAACTTATCTGTGACTGTCCTGGATGACCCACCTTCTGGTGATCTGCTAATCCCAGAAAATCAAAACGGACTAGTAGAGGATGATTCTGCTTGTGGTAATTTGGACCATGAAACTGTTGAAAACCTTACTGATAACTGTCAAAATGCTGTCAAGAGTTTTGATAAAGAAGAAAGCTCGAAAAGCAATAATAGAGTGGAAAAAATTCATGTATACAGAAGAACAATGACAAAGGACAGTAAAAAAGGAAATCCCATAGATTCATTGAGTAAATCTCCTGGGGATTTAGGCTCCAGTGTCATGGATAGTAAAGATCAATTTGATTCTGCTGTAAGTGCTGAATATTTGGGAAAAGCAAATGACAAGATGGAGATGGTGGAGGATGTTAATGCTACTTTAAGAAGTGAGGATAACAGTGAGCTTCTAAAAAAATGTGAAGCACAGGTCTCTCCCGAAACCAAACCTAAAGAAGTGGATGTGGATATGGGAACGAGTAGCACTGTTGATAATAAATTTCTTGATGCTAATGTGGTTGAATCTTCATGTCTAAATATAGAGGAAGTTTTCTATGAATTTTTGGTCAAGTGGGTAGGAAAGTCACATATTCATAATAGTTGGATTTCAGAATCCCAGTTGAAACTTCTTGCGAAGAGAAAATTTGAAAATTACAAGGCAAAGTATGGGATGGCCATAATAAATATCTGTGAGGAGCGTTGGAAGCAGCCTCAGCGGGTGCTTGCTCTCCGAACATCCAAAGGCGGAACATCTGAAGCATTTGTAAAATGGACTGGACTACCTTATGATGAATCCACTTGGGAAAGTTTAGACGAACCTGTTCTTCAAACTTCTTCACATCTGATTAGTCTTTTTAACAAATTTGAAACTCTCACGCTAGAAAGGGATCCATCACAGAGTAATTCAACTAGGAAAAACAATGACAGTCAAAATGATATAGTTAATCTTACAGAACAACCTAAGGAGCTAAAAGGTGGTTCTTTGTTTCCCCATCAGCTCGAGGCTCTGAACTGGTTGCGGAAATGCTGGTATAAATCCAAAAATGTGATACTTGCTGATGAAATGGGGCTTGGAAAAACAGTATCTGCTTGTGCCTTTATGTCGTCATTGTATTGTGAATTCAAAGTTGGACTGCCCTGCTTGGTCTTAGTCCCACTGTCCACAATGCCTAACTGGCATGCTGAATTTGCATTATGGGCTCCAGACTTGAATGTTGTGGAATATCATGGTTGTGCAAAAGCAAGAACTATAATTCGCCAGTATGAATGGCATGCTAGCAATCCAAGTGGATTGAATAAAAAAACGGCTGCCTATAAATTTAACGTGCTCTTGACTACATATGAAATGGTTCTTGCTGATTCTTCTCATTTGCGTGGAGTTCCTTGGGAAGTTCTTGTGGTCGATGAGGGACATCGACTAAAGAATTCTGAAAGTAAGCTTTTCAGCCTGCTCAACACATTCTCTTTTCAACATCGTGTACTGCTGACTGGTACCCCTCTCCAGAACAACATTGGTGAGATGTACAATTTGCTCAATTTCTTACAACCAGCTTCATTTCCTTCTCTATCTTCATTCGAGGAGAAATTCAATGATCTTACGACTGCAGAGAAAGTTGAGGAGTTGAAAAAACTTGTTGCCCCTCATATGCTTCGTAGGCTTAAAAAGGATGCCATGCAAAATATTCCACCCAAGACAGAAAGAATGGTTCCTGTTGAGTTGTCATCCATCCAAGCTGAATATTACCGTGCGATGCTTACAAAGAATTATCAAATATTGAGGAATATTGGGAAAGGGGTTGCGCAACAATCTATGCTAAACATTGTGATGCAACTTAGAAAGGTCTGCAATCATCCGTATCTCATACCAGGAACTGAGCCTGAGTCTGGATCAGTTGAGTTTCTTCAGGAAATGAGAATAAAGGCTTCAGCCAAGTTGACTCTTCTGCATTCTATGCTGAAGATTTTATATAAAGAAGGACACAGAATCCTTATTTTCTCACAAATGACCAAGCTTCTTGATATCCTAGAGGACTATTTAAGCATAGAATATGGGCCTAAAACTTATGAGAGAGTGGATGGCTCTGTTTCTGTGGCTGATCGTCAAACAGCAATTGCACGGTTTAACCAAGACAAAAGTCGATTCGTTTTCTTGTTATCCACTCGGTCCTGTGGTCTTGGGATAAATTTGGCAACTGCTGACACTGTCATTATCTATGATTCTGATTTCAACCCACATGCTGATATCCAGGCAATGAATCGAGCACATAGAATTGGACAATCAAATAGACTTTTGGTATATCGCCTTGTGGTTCGAGCCAGTGTTGAAGAGCGCATCTTGCAACTTGCTAAGAAGAAGTTAATGCTTGATCAGCTTTTTGTAAATAAGTCTGGATCTCAAAAAGAAGTAGAGGATATTTTAAAATGGGGTACTGAAGAACTCTTCAATGATTCTCCTGGGCAGAATGGGACAAGTATAAGTGAAAATAATAGCAACAAAGATGAGACAGTAGTAGATATAGAACATAAGCATCGGAAGAGGACTGGTGGTCTGGGAGATGTATACAAGGATAAGTGTACAGATGGCAGCAGCAAAATCATGTGGGATGAAAATGCAATTTTAAAATTGCTTGATCGTTCAAACCTTCAAGATGGTTCAACAGATGTTGCTGAAGGGGATTCTGAGAATGATATGCTGGGTTCGGTTAAGTCCCTTGAATGGAATGACGAACCAGCTGAAGAACATGGGGTAGGTGAATCACCTCCTTGCAGGACTGATGATATCTGTGCACAAAATTCTGAAAGGAAAGAGGATAATGTGGTGATTAGTGCTGAAGAAAATGAATGGGACAAACTACTGCGTGTGAGGTGGGAGAAATATCAGAGTGAGGAGGAAGCGGCTCTTGGTCGAGGAAAACGGCTGAGGAAAGCTGTTTCTTATAGGGAAGCATATGCTCCACACCCAAGTGAAACAATGAGTGAGAGTGGTGGCGAGGAGGAAAGAGAGCCAGAACCAGAGCCTGAGCGTGAATATACACCAGCAGGACGGGCGCTAAAAGCAAAATTTGCTAAGCTCCGTGCACGGCAGAAGGAACGACTTGCTCAAAGGAATGCAGTTGGAGGATCCCATGCTGCTGAGGGACTCCCTGGAACTGAGTCACTCCCCCAGTCTCCTGCCAATGCCAAGAGTTTGGATCATGCCACTGGACCTAAGCATCCAGTTGGAGAGGGTCCTTCTATCAATTTAGAGGACAACAAATCTGTTGAAATTCCTGAAGCTCAGAAGAGCAACCCTGATTCCATTTCAAGAATGGGCAGGATATCGAAACACAGAATGAGCAGTCACTTTGACGTTCCTGTCAATAATCTAGGCCATTCTCCACCTGATATTTTCCTTCCAAATCATCATTATATGGGACTGAACATCACAAACTCTTTGCCCACCAACAATTTTTTACCTGTTCTAGGACTTTGTGCTTCTAATGCTAGCCAAGTGGAATCATTGGAAAGTAATCATTCGAAGTTAAATTGGAGACAAAATAGACGGGGAGCCAGACAGGAGTTCCCATTTAGCCTTGCCCCTTGCTCTGGGATGACATCCAAGGAAGCTGAGGTCAGAAGTCAGGAGACAGATGCACTGGCAGAAATTCTACAGGAGAGTTTCAAGAATAGAATCCCTGATAACAGTCTCCCTTTTGTTCCTTTTCTACCGGCTGTGCAAGGAAAGGAATCTGATGCATTTGAAAATTCAGGTTCTAGATTCTCTGCTTTCCAGGAGAAGATGGCCCTGCCAAACCTGCCATTTGATGAAACGTTGCTGGCCAGATTTCCACTTACAAATAAGAACATTCCAAATTCACAGCCGGAACCTTTACCTAATTTGTCATTAGGTGGTAGACTTGAAGCTTTGAACAGCTCTGTGCAAGACCTTCCAACAATGCCATTATTGCCTAAATTCAAAATTCCCCCAGAAGATTTATTCAGATTTAATCAGCGAGATGGGGATATGCTCCCTACTTTGGGTTTGGGACAAAGGCCAACTTCATCCACATCATTCCCAGAAAACCATAGGAAGGTGCTTGAAAACATAATGATGAGAACTGGATCTGCATCAAGTAACTTATATAAAAAGAAGTCAAAATCAGATGGATGGTCTGAAGATGAACTTGATTCCCTCTGGATTGGTGTCCGTAGGCATGGAAGAGGTAATTGGGATGTTATGCTTAGAGATCCAAAGTTGAAGTTTTCAAAGTATAAAACGTCTGAAGATTTGTTGGTGAGGTGGGAAGAGGAACAAGTCAAGGTCTTTCAGGGGCCAGCTTTTCCTATGCCAAAATCGACCAAGATGACAAGGTCTAGCAAGTCTGCCCTTTTTCCAATCTCTGATGGAATGATGGAAAGGGCCTTGCATGGGAGCAGATTTATCATGCCACCAAAATTTCAAAACCATTTGACTGACATGAAATTAGGGGTTGGTGATCCTGCATCCGGTATGCCACATTTTAGAACATCAGATCGACCTAGTTTTCAAAATGATCATTTTGCACCTCTTCCATCTTTTAATTATGATATACACAGAGCAAGGTTTCCTGAAGATGCTTCTGCTGAACCATCCGATAGACCTGGGACTTCTTCGAATGTACCTGCTGAAAGACCTTTTCTACTAGATTCTTTTGGAACCAGCTGCTTGGGTGCCTTAGGTTTGAATTGCTCAGGAAGTGTTGATATATCACAAAAAGAGGATCAACAAGGCGCCAGCAAGTGTGGAAAGTTGCCTGGACCTCTGGATTCATTTAATGATATGCATGATAATGGCATCAATGTAGGAAATGGTGAATCTACTAGTTCAGCATTGCTATCTGACCCCATCAAAGGAGCTGAACCTTTGCTCTCAAAAGGGGAGGAAGGAGCTGGAACTGGAAGTAGTACTTCAAAAGACAAGCTTCCCCACTGGTTACGGGAAGCTGTAAGCCCTCCTGCCAAAAACCCTGATCCTGACCTGCCACCCACTGTATCAGCAATTGCTCAATCGGTTCGCATGGTATATGGAGAAAATAAGCCTACAATTCCTCCATTTGTGATTCCCAGTCCACCTCCTTCCCTGCCAAATGACCCCAGGTGTAATGCAAAGAGAAGAAAGAGGAGAAGATCTAGAATTCCTCCATTTGCGATTCCCAGTTCACTGCCAAATGACTCCAGTTGTAGTCGAAAGAGAAAGAAGAGAAGATGGCTCCAACGAGCTGTTGCTGGAAGCAGCAAGGACTTCCACAGCAGCCTCCATGTTGCTGATAATGGTGCTTCAAGCTCAATGCCCTTAGTCCCATCTTTTCCTCTCCTTTCTCAGACAGGAACTTCAGGACTTCAGCAGATTGAATCTGACCTCAACTTGGTAAACCCATCTCACTCATTGGTGCACCAACCGAAAAGGACGAGCACAGGGCTGTCTCCTTCTCCCGAAGTGCTCCAGTTGGTGGCATCATGTGTTGCACCCAGTCCACATCTCCCATCAATTTCTGGCACTTCAAGATTTCTTGACGGCAAGCTCCCCTTGCCAATGCCTGTTAAGCGAGCTGAATCACCAAATATTCGGGGTCCACTTCAGGATCATAAAGTAGAACCCCCGGATAGTGGAGATTCCAGCAAGACTCAGTCCGATCCCACTCGAATTGAACGGCCGGATGAAGGGGAGATATCATCTGAGGGGACTGTCTCAGATCACGCTTTAAGAGATCAGGAAACATAG 7218 0.4241 MRSKSEGTLKRRTTGGAKTPGGATWQNRSGRVHWGSTRTATTTTTTSTPPLLSLSLLPCQSVTPSHGYDPGESVFVENKSSTSKMINRNWVLKRKRRKLSLEQSNGKVDNSVASESSRNASAKHPLKTEVATGQFSSKKKGNDGYFYECVVCDLGGNLLCCDSCPRTYHLQCLSPPLKRIPMGKWQCPSCSQGNDQLKPINHLDSISKRARTKSVAAKSKNGVSSLNKDKVSRIFGSTLVSKKRSSSKGKSISTSGVKFLGKKTLSSPVDVTFSNKPRDPSLGSSMEGTSSCADADEEKKSNMPLTVLPMDRKSTSTVDEVLSTSKVTDLEADDARMEGKPDLSCNEIPLRKTLVLAVAAAGGEVRKRKHKVSVNSSQKKCKTEKGKSTVNTSTKCKSGNNKVHKKQKSVNHSISASLSKEDVGTKSSDVEQKDEKFPQVMKNTTREFDKAASHVDETLMHEDCAVVESLQVDRVLGCRVQGENINSSRNLSVTVLDDPPSGDLLIPENQNGLVEDDSACGNLDHETVENLTDNCQNAVKSFDKEESSKSNNRVEKIHVYRRTMTKDSKKGNPIDSLSKSPGDLGSSVMDSKDQFDSAVSAEYLGKANDKMEMVEDVNATLRSEDNSELLKKCEAQVSPETKPKEVDVDMGTSSTVDNKFLDANVVESSCLNIEEVFYEFLVKWVGKSHIHNSWISESQLKLLAKRKFENYKAKYGMAIINICEERWKQPQRVLALRTSKGGTSEAFVKWTGLPYDESTWESLDEPVLQTSSHLISLFNKFETLTLERDPSQSNSTRKNNDSQNDIVNLTEQPKELKGGSLFPHQLEALNWLRKCWYKSKNVILADEMGLGKTVSACAFMSSLYCEFKVGLPCLVLVPLSTMPNWHAEFALWAPDLNVVEYHGCAKARTIIRQYEWHASNPSGLNKKTAAYKFNVLLTTYEMVLADSSHLRGVPWEVLVVDEGHRLKNSESKLFSLLNTFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSFEEKFNDLTTAEKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLTKNYQILRNIGKGVAQQSMLNIVMQLRKVCNHPYLIPGTEPESGSVEFLQEMRIKASAKLTLLHSMLKILYKEGHRILIFSQMTKLLDILEDYLSIEYGPKTYERVDGSVSVADRQTAIARFNQDKSRFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAHRIGQSNRLLVYRLVVRASVEERILQLAKKKLMLDQLFVNKSGSQKEVEDILKWGTEELFNDSPGQNGTSISENNSNKDETVVDIEHKHRKRTGGLGDVYKDKCTDGSSKIMWDENAILKLLDRSNLQDGSTDVAEGDSENDMLGSVKSLEWNDEPAEEHGVGESPPCRTDDICAQNSERKEDNVVISAEENEWDKLLRVRWEKYQSEEEAALGRGKRLRKAVSYREAYAPHPSETMSESGGEEEREPEPEPEREYTPAGRALKAKFAKLRARQKERLAQRNAVGGSHAAEGLPGTESLPQSPANAKSLDHATGPKHPVGEGPSINLEDNKSVEIPEAQKSNPDSISRMGRISKHRMSSHFDVPVNNLGHSPPDIFLPNHHYMGLNITNSLPTNNFLPVLGLCASNASQVESLESNHSKLNWRQNRRGARQEFPFSLAPCSGMTSKEAEVRSQETDALAEILQESFKNRIPDNSLPFVPFLPAVQGKESDAFENSGSRFSAFQEKMALPNLPFDETLLARFPLTNKNIPNSQPEPLPNLSLGGRLEALNSSVQDLPTMPLLPKFKIPPEDLFRFNQRDGDMLPTLGLGQRPTSSTSFPENHRKVLENIMMRTGSASSNLYKKKSKSDGWSEDELDSLWIGVRRHGRGNWDVMLRDPKLKFSKYKTSEDLLVRWEEEQVKVFQGPAFPMPKSTKMTRSSKSALFPISDGMMERALHGSRFIMPPKFQNHLTDMKLGVGDPASGMPHFRTSDRPSFQNDHFAPLPSFNYDIHRARFPEDASAEPSDRPGTSSNVPAERPFLLDSFGTSCLGALGLNCSGSVDISQKEDQQGASKCGKLPGPLDSFNDMHDNGINVGNGESTSSALLSDPIKGAEPLLSKGEEGAGTGSSTSKDKLPHWLREAVSPPAKNPDPDLPPTVSAIAQSVRMVYGENKPTIPPFVIPSPPPSLPNDPRCNAKRRKRRRSRIPPFAIPSSLPNDSSCSRKRKKRRWLQRAVAGSSKDFHSSLHVADNGASSSMPLVPSFPLLSQTGTSGLQQIESDLNLVNPSHSLVHQPKRTSTGLSPSPEVLQLVASCVAPSPHLPSISGTSRFLDGKLPLPMPVKRAESPNIRGPLQDHKVEPPDSGDSSKTQSDPTRIERPDEGEISSEGTVSDHALRDQET 2405
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi03g0190 2405 MobiDBLite consensus disorder prediction 1401 1420 - -
Glsi03g0190 2405 MobiDBLite consensus disorder prediction 270 299 - -
Glsi03g0190 2405 ProSiteProfiles Chromo and chromo shadow domain profile. 728 790 IPR000953 -
Glsi03g0190 2405 Pfam CHD subfamily II, DUF1087 1435 1474 IPR009463 -
Glsi03g0190 2405 SUPERFAMILY Chromo domain-like 720 767 IPR016197 -
Glsi03g0190 2405 ProSiteProfiles Chromo and chromo shadow domain profile. 655 714 IPR000953 -
Glsi03g0190 2405 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 1140 1299 IPR001650 -
Glsi03g0190 2405 ProSitePatterns Zinc finger PHD-type signature. 149 190 IPR019786 -
Glsi03g0190 2405 Gene3D - 1848 1948 - -
Glsi03g0190 2405 CDD PHD2_CHD_II 149 190 - -
Glsi03g0190 2405 Pfam PHD-finger 149 192 IPR019787 -
Glsi03g0190 2405 MobiDBLite consensus disorder prediction 104 123 - -
Glsi03g0190 2405 MobiDBLite consensus disorder prediction 2182 2196 - -
Glsi03g0190 2405 MobiDBLite consensus disorder prediction 100 125 - -
Glsi03g0190 2405 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 126 203 IPR013083 -
Glsi03g0190 2405 ProSiteProfiles Zinc finger PHD-type profile. 146 193 IPR019787 -
Glsi03g0190 2405 MobiDBLite consensus disorder prediction 19 50 - -
Glsi03g0190 2405 MobiDBLite consensus disorder prediction 2324 2405 - -
Glsi03g0190 2405 MobiDBLite consensus disorder prediction 2354 2368 - -
Glsi03g0190 2405 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 833 1010 IPR014001 -
Glsi03g0190 2405 MobiDBLite consensus disorder prediction 1309 1336 - -
Glsi03g0190 2405 Gene3D - 643 715 - -
Glsi03g0190 2405 MobiDBLite consensus disorder prediction 2118 2141 - -
Glsi03g0190 2405 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1047 1300 IPR027417 -
Glsi03g0190 2405 Pfam Chromo (CHRromatin Organisation MOdifier) domain 729 780 IPR023780 -
Glsi03g0190 2405 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 796 1045 IPR027417 -
Glsi03g0190 2405 Gene3D - 1055 1282 IPR027417 -
Glsi03g0190 2405 MobiDBLite consensus disorder prediction 1525 1594 - -
Glsi03g0190 2405 MobiDBLite consensus disorder prediction 373 433 - -
Glsi03g0190 2405 Pfam SNF2-related domain 839 1114 IPR000330 GO:0005524|GO:0140658
Glsi03g0190 2405 FunFam chromodomain-helicase-DNA-binding protein 1-like isoform X1 1055 1282 - -
Glsi03g0190 2405 Gene3D - 812 1054 IPR038718 -
Glsi03g0190 2405 MobiDBLite consensus disorder prediction 270 291 - -
Glsi03g0190 2405 MobiDBLite consensus disorder prediction 2181 2232 - -
Glsi03g0190 2405 SMART ultradead3 817 1021 IPR014001 -
Glsi03g0190 2405 MobiDBLite consensus disorder prediction 1474 1508 - -
Glsi03g0190 2405 MobiDBLite consensus disorder prediction 562 590 - -
Glsi03g0190 2405 Gene3D - 730 780 - -
Glsi03g0190 2405 CDD CD2_tandem 727 780 - -
Glsi03g0190 2405 Pfam Helicase conserved C-terminal domain 1141 1251 IPR001650 -
Glsi03g0190 2405 SMART PHD_3 148 191 IPR001965 -
Glsi03g0190 2405 SMART chromo_7 469 716 IPR000953 -
Glsi03g0190 2405 SMART chromo_7 726 783 IPR000953 -
Glsi03g0190 2405 PANTHER CHROMODOMAIN-HELICASE-DNA-BINDING PROTEIN 3-RELATED-RELATED 228 2304 - -
Glsi03g0190 2405 CDD SANT_TRF 1876 1920 - -
Glsi03g0190 2405 SMART helicmild6 1166 1251 IPR001650 -
Glsi03g0190 2405 CDD CD1_tandem 678 712 - -
Glsi03g0190 2405 CDD SF2_C_SNF 1135 1262 - -
Glsi03g0190 2405 MobiDBLite consensus disorder prediction 574 590 - -
Glsi03g0190 2405 SMART DUF1087_2 1419 1480 IPR009463 -
Glsi03g0190 2405 MobiDBLite consensus disorder prediction 1 50 - -
Glsi03g0190 2405 SUPERFAMILY Chromo domain-like 678 716 IPR016197 -
Glsi03g0190 2405 MobiDBLite consensus disorder prediction 1309 1325 - -
Glsi03g0190 2405 MobiDBLite consensus disorder prediction 2376 2405 - -
Glsi03g0190 2405 SUPERFAMILY FYVE/PHD zinc finger 146 194 IPR011011 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi03g0190 Glsi-ChrGlsi03 2998831 3017705 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi03g0190 801 1294 RAD5 or RAD16-like Gene Family AT1G02670 25.430 7.50e-35 142
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR PHD Glsi03g0190 SNF2_N 2.5e-57 CL0023