LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Glsi03g0188	ATGGCTTCAATAAACTCCGATGGAGACAGTGATAACAAAGGTAGCATGTGGGTTTTGGATCAGAAGCTTGACCAGCCTATGGATGAAGAGGCGGGAAGACTCAGAAATATGTACAGAGAAAAAAAATTCTCTGCACTGTTGCTTCTGCGGCTTGCATATCAGAGTCTTGGTGTGGTTTATGGAGATTTGGGCACTTCCCCTTTGTACGTTTTCTACAATACATTTCCTCATGGAGTTAAAGATCGAGAGGACGTAATTGGAGCTCTTTCTTTGATTATATACTCTCTTACTCTGGTACCGCTCCTCAAATATGTTTTTGTTGTATTAAGAGCAAATGACAATGGCCAAGGTGGAACATTAGCGCTTTATTCCTTGCTTTGCCGACATGCTAAAATAAAAACCATTCCTAATCAGCATCGTACTGATGAGGAGCTGACAACTTATAGTCGGTCTACCTTCCATGAAAGGTCATTTGCTGCAAAAACCAAAAGATGGTTAGAGGAACAAGCATTTAAGAAGAATGCCATTCTTATTCTTGTTCTTGTTGGCACCTGCATGGTGATTGGAGATGGGATACTTACTCCAGCTATATCTGTTTTATCGGCTTCTGGTGGCATCAAGGTTAACAAGCCCGAGACAAGTAATGAAGTAGTTGTGCTGGTTGCTGTTGTGATATTAGTTGGTTTATTCAGCATGCAACATTATGGTACAGATAGAGTTGGTTGGCTCTTTGCTCCAATTGTCCTCCTATGGTTTCTTCTAATTGGAGGTATAGGTATATTCAACATCTGGAAATATGACAGCAGCGTTCTGAAAGCTTTTTCACCTGTGTACATATATCGGTACTTCAGAAGAGGAGGAAAAGAAGGTTGGACTTCCCTTGGAGGTATCATGCTCAGCATAACAGGGACAGAGGCTCTTTTTGCAGACCTAGCTCATTTTCCGGTTTCAGCTGTACAGATTGCATTTACTTTTCTTGTGTTCCCTTGCCTTCTTCTAGCCTATTCTGGGCAAGCTGCTTACCTTATGAATAACTTGGGTCATTCACAAGATGCTTTTTATCGCTCTATTCCAGATAGCATATATTGGCCAGTATTTGTTGTTGCAACAGCAGCAGCTATAGTTGCAAGCCAGGCAACAATATCTGCAACTTTTTCGATTATCAAGCAAGCCCTTGCACATGGTTGTTTCCCTAGAGTCAAAGTTGTACATACATCAAAGAAGTTTCTTGGCCAGATATATGTTCCAGATATTAATTGGATCCTCATGATTCTTTGCATCTCTGTTACTGCTGGGTTCAAAAATCAAAATCAGATTGGAAATGCATATGGTACTGCAGTTGTGATAGTGATGTTGGTTACAACATTGCTTATGATACTAATCATGATATTAGTGTGGCGCTGCCATTGGATTCTTGTCCTCATCTTCACTGGCTTATCACTGGTTGTTGAATGCACTTACTTCTCTGCTGTCCTCTTCAAAGTTGATCAAGGAGGGTGGGTTCCACTTGTAATCGCTGCAGCATTTCTTATTATCATGTATGTTTGGCATTATGGTACAGTGAAACGCTACGAGTTTGAAATGCATAGTAAGGTCTCAATGGCATGGATTCTTGGGCTTGGCCCAAGTTTAGGGCTTGTTCGTGTCCCTGGGATTGGATTAGTCTACACAGAGCTTGCAAGTGGAGTACCCCACATCTTTTCCCACTTCATCACCAACCTACCTGCCATCCATTCTGCAGTTATTTTTGTATGTGTGAAATACCTCCCTGTCTACACTGTTCCAGAAGAAGAACGATTCCTTGTCAAGCGAATTGGACCTAAGAATTATCACATTTTCCGATGCGTGGCACGATATGGCTATAAAGACCTGCATAAGAAAGATGAAGATTTTGAGAAAAAACTCTTTGATAATCTTTTCATGTTTGTCCGGCTTGAGTCTATGATGGAAGGATGTTCAGATTCAGATGACTACAGTTTACCTGGACAACAAACAGTGCAGTCAAGAGATGCCCTGCTAAATAACAATGGTGGAAACACAATTTCATCTACTATGGATTTAACAATTTCATCGGTGGATTCAATAGTGCCAGTTGGATCTCCGTCGCATTTAAATATTACTATCAGGTCCTCTGGTCAAGTAAGTAGCCAGACCGAGGTTGATGAACTTGAATTTTTGAACAACTGCAGGGATGCTGGGGTGGTTCACATACTAGGAAACACAGTTGTGAGAGCTAGGAGGGATTCAAGGTTCTACAAGAAAATAGCAGTTGATTATATATATGCATTCCTTAGGAAGATATGCAGGGAGAATAGTGTGATCTTCAATGTTCCTCATGAGAGTCTTTTAAATGTTGGTCAGATATTCTATGTATAG	2376	0.4082	MASINSDGDSDNKGSMWVLDQKLDQPMDEEAGRLRNMYREKKFSALLLLRLAYQSLGVVYGDLGTSPLYVFYNTFPHGVKDREDVIGALSLIIYSLTLVPLLKYVFVVLRANDNGQGGTLALYSLLCRHAKIKTIPNQHRTDEELTTYSRSTFHERSFAAKTKRWLEEQAFKKNAILILVLVGTCMVIGDGILTPAISVLSASGGIKVNKPETSNEVVVLVAVVILVGLFSMQHYGTDRVGWLFAPIVLLWFLLIGGIGIFNIWKYDSSVLKAFSPVYIYRYFRRGGKEGWTSLGGIMLSITGTEALFADLAHFPVSAVQIAFTFLVFPCLLLAYSGQAAYLMNNLGHSQDAFYRSIPDSIYWPVFVVATAAAIVASQATISATFSIIKQALAHGCFPRVKVVHTSKKFLGQIYVPDINWILMILCISVTAGFKNQNQIGNAYGTAVVIVMLVTTLLMILIMILVWRCHWILVLIFTGLSLVVECTYFSAVLFKVDQGGWVPLVIAAAFLIIMYVWHYGTVKRYEFEMHSKVSMAWILGLGPSLGLVRVPGIGLVYTELASGVPHIFSHFITNLPAIHSAVIFVCVKYLPVYTVPEEERFLVKRIGPKNYHIFRCVARYGYKDLHKKDEDFEKKLFDNLFMFVRLESMMEGCSDSDDYSLPGQQTVQSRDALLNNNGGNTISSTMDLTISSVDSIVPVGSPSHLNITIRSSGQVSSQTEVDELEFLNNCRDAGVVHILGNTVVRARRDSRFYKKIAVDYIYAFLRKICRENSVIFNVPHESLLNVGQIFYV	791

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Glsi03g0188	791	Pfam	K+ potassium transporter	53	623	IPR003855	GO:0015079\|GO:0016020\|GO:0071805
	Glsi03g0188	791	NCBIfam	potassium uptake protein	51	790	IPR003855	GO:0015079\|GO:0016020\|GO:0071805
	Glsi03g0188	791	PANTHER	OSMOTIC STRESS POTASSIUM TRANSPORTER	41	789	IPR003855	GO:0015079\|GO:0016020\|GO:0071805

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Glsi03g0188	Glsi-ChrGlsi03	2987898	2995615	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Glsi03g0188	6	791	Inorganic Solute Cotransporters	AT2G35060	81.321	0.0	1267