Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi03g0124 ATGAAGGAGGGTAGAAAGCAAGGTGCACCTTCTCCCTGCGCAGCATGCAAGCTTCTTCGCAGAAGATGTGCTCAAGATTGTGTCTTTGCTCCTTATTTTCCAGCAGATGAGCCCCAGAAGTTTGCTAATGTTCACAAGGTTTTTGGAGCCAGTAATGTCAACAAGATGCTTCAGGAGCTACCAGTGCATCAACGAGGAGATGCAGTGAGTAGCATGGTGTACGAGGCTAATGCCAGAGTGAGAGACCCAGTGTATGGGTGCGTTGGGGCCATCTCTTCTCTTCAGCAACAGATTGATGTGCTTCAGACCCAACTGGCCCTAGCTCAGGCCGAGGTTGTGCACCTTCGGGTTAGCCAGACTGCATGCATAACCAACCACGGGCTCAGCCCCACTAGCCCAACCAACAGTGGGTCCCCACCTTCCAAGCTCATGGGTTCACAAGCCAAGCCTATTTTTGACATGGACATGGTGGTGGACCAGTCCACTTACGGTGATTCCATGTGAGTAGGAGCTGCGGCGGCGGTTGTGGTGGTAGTGGCGACGGTGAAAGTAGCTGTGGCGGAGGGGTTCGCCCGCATAATTATTAATTTGAACCATGAGCTATTTCTAATTCAGATGGGTTTCATTTTCGTTCGCAGGGCAATTCATACAAAAAGATAA 660 0.5076 MKEGRKQGAPSPCAACKLLRRRCAQDCVFAPYFPADEPQKFANVHKVFGASNVNKMLQELPVHQRGDAVSSMVYEANARVRDPVYGCVGAISSLQQQIDVLQTQLALAQAEVVHLRVSQTACITNHGLSPTSPTNSGSPPSKLMGSQAKPIFDMDMVVDQSTYGDSMXVGAAAAVVVVVATVKVAVAEGFARIIINLNHELFLIQMGFIFVRRAIHTKR 219
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi03g0124 219 ProSiteProfiles LOB domain profile. 11 112 IPR004883 -
Glsi03g0124 219 Coils Coil 91 111 - -
Glsi03g0124 219 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 10 132 - -
Glsi03g0124 219 Pfam Lateral organ boundaries (LOB) domain 12 109 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi03g0124 Glsi-ChrGlsi03 1887122 1891755 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi03g0124 1 167 AS2 family AT1G31320 78.107 3.12e-76 225
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Glsi03g0124 LOB 2.4e-43 No_clan