Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi03g0116 ATGAGCTTTCGTTTTTCAATTTTGGGATTATATGAGAAGTCATCCTGTAGTTTGCATATAGCAGTGCAAGTCTACAAGACACTCCTTTTTTTGGGTGAAGAAGCCTGGAGATTATCAAGCTTGGGGTTGCTGCAAGGATCGCAGAGGAAGGAAGTCGGAGGGAGAATCGAAGGCCGCAAAGCTCGCATCCGAGGAGACGACGGGCCTCTAATCATTTTGCTACATAATGTTGAAGTGATACAGACCAATTCGAGCTTGAGTGTCGATATCTATTCAGTTCAGTGCACAGAAAAATTGTTACATATGGCAGGATTTATGTCTGGGGAGCCATTGCATAATGGAGCATCTGATGGCAGCACTAGTAAAAGCTTTGAAGACAAGCAAGAGGAAGCTGGAGTTCGTTGGTATATGTCTAGGAAAGAGATAGAGGAAAATTCTCCATCAAGAAAAGATGGAATTGACTTGAAGAAGGAGACATATCTGCGCAAGTCATACTGCACATTCTTACAGGATTTAGGCATGAGGCTTAAAGTGCCCCAGGTAACTATAGCAACAGCCATAATTTTTTGTCATCGGTTCTTTCTTCAACAATCTCATGCAAAGTTCGATAGAAGGACCATTGCAACTGTCTGTATGTTCCTTGCTGGGAAGGTTGAGGAGACACCTCGACCGCTAAAGGATGTTATTCTTGTTTCTTATGAGATTATTCACAAGAAGGATCCTGCTGCTGCACAAAGGATAAAACAGAAGGAAGTATATGAGCAGCAGAAAGAGTTAATTTTACAATTTGAGAGGGCCATACTTACAACTTTAGGTTTTGATCTTAATGTTCAACATCCCTACAAGCCCCTTGTTGAGGCCATAAAGAAGTTCAATGTTGCAAAGAATGCCCTTGCACAAGTTGCGTGGAACTTTGTTAATGATGGGCTGAGGACATCGCTCTGCCTGCAATTTAAGCCACATCATATTGCGGCAGGTGCCATTTTCCTTGCTGCTAAGTTCCTAAAAGTGAAGCTTCCTTCAGACGGTGAGAAGGTTTGGTGGCAAGAGTTTGATGTCACCCCACGCCAATTGGAGGAGGTTAGCAATCAAATGCTGGAACTCTATGAGCAGAATAGAGTTCCACCATCTCAAGGAAGTGAAGTAGAAGGAAGTGCTGGAGGGGGAACAAGAGCTGCTGCGAAAGCTCCTGCTGTGAATGAGGAGCAGGCTTCAAAACAAATGCCATCTCGTGTGGCTCCTCAGAACTCATCTGCAGAAAATCACGAGGTGCCATTAACAGGCACGGAAAACCAAAGCAATGATGGGAGTGCAGAAATGGGTAGTGTGATTACTGATCACAAATTGGACATGGAAATTAGAGATACTCAGCACTCTGAGCAGTTGCCTCAGAAAGATTGTAAGAGAGAAGTGACAAATAGATCGGGAAATGAGCGAATAGGTGCAGGAGACCAAGATAGATTGGGTGGGAGAAAGGAGGATGCAGAAGTAGAAAGGAGGGATGATTCAGCATCACGCAAGTCTGGCTCCATTGCTGGTCGAAATTTAGAGCATCGGGAAGGCCCACTTGGTCAGACACCCAAGGAAGCAATTAAAATGATTGACAAAGACAAAGTGAAGGCTGCATTGGAAAAAAGAAGGAAGGCACGAGGGGAAATTACACTGAAGAAAGATGTAATGGATGACGATGATCTCATTGAGAGGGAGCTAGAAGATGGAGTTGAGTTGGCAGTTGAGGATGAGAAAAATAAGCGGGAGAGGAGACAGAACTGGTTGAAACCTGAAAATGAACATCGTGAATGGGATCATGAGGAAATCAGAGATGGGAAAAGCACAGGCATAAAAGGGAGGCTGCCTCAAGAAGTGGAAGCAGAGAATGCAGAAGAAGGGGAGATGATAGATGATGCTTCATCCTTATTGAACAATCGCAAGAGAAAGGCGGGTAGCTCACCAGATGGGCAGTCTGAGGTGAAAAAGCGGCCTGATCCCAGTTCCGACAATGATCCTGCAGAAGATGGAAACTGA 2025 0.4444 MSFRFSILGLYEKSSCSLHIAVQVYKTLLFLGEEAWRLSSLGLLQGSQRKEVGGRIEGRKARIRGDDGPLIILLHNVEVIQTNSSLSVDIYSVQCTEKLLHMAGFMSGEPLHNGASDGSTSKSFEDKQEEAGVRWYMSRKEIEENSPSRKDGIDLKKETYLRKSYCTFLQDLGMRLKVPQVTIATAIIFCHRFFLQQSHAKFDRRTIATVCMFLAGKVEETPRPLKDVILVSYEIIHKKDPAAAQRIKQKEVYEQQKELILQFERAILTTLGFDLNVQHPYKPLVEAIKKFNVAKNALAQVAWNFVNDGLRTSLCLQFKPHHIAAGAIFLAAKFLKVKLPSDGEKVWWQEFDVTPRQLEEVSNQMLELYEQNRVPPSQGSEVEGSAGGGTRAAAKAPAVNEEQASKQMPSRVAPQNSSAENHEVPLTGTENQSNDGSAEMGSVITDHKLDMEIRDTQHSEQLPQKDCKREVTNRSGNERIGAGDQDRLGGRKEDAEVERRDDSASRKSGSIAGRNLEHREGPLGQTPKEAIKMIDKDKVKAALEKRRKARGEITLKKDVMDDDDLIERELEDGVELAVEDEKNKRERRQNWLKPENEHREWDHEEIRDGKSTGIKGRLPQEVEAENAEEGEMIDDASSLLNNRKRKAGSSPDGQSEVKKRPDPSSDNDPAEDGN 674
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi03g0116 674 MobiDBLite consensus disorder prediction 455 528 - -
Glsi03g0116 674 Gene3D - 277 381 - -
Glsi03g0116 674 SMART cyclin_7 167 269 IPR013763 -
Glsi03g0116 674 SMART cyclin_7 282 367 IPR013763 -
Glsi03g0116 674 MobiDBLite consensus disorder prediction 579 674 - -
Glsi03g0116 674 FunFam Cyclin-T1-5 like 125 275 - -
Glsi03g0116 674 MobiDBLite consensus disorder prediction 649 667 - -
Glsi03g0116 674 MobiDBLite consensus disorder prediction 403 440 - -
Glsi03g0116 674 MobiDBLite consensus disorder prediction 371 440 - -
Glsi03g0116 674 MobiDBLite consensus disorder prediction 455 507 - -
Glsi03g0116 674 FunFam Cyclin-T1-5 like 277 381 - -
Glsi03g0116 674 CDD CYCLIN_AcCycT_rpt2 278 370 - -
Glsi03g0116 674 SUPERFAMILY Cyclin-like 134 277 IPR036915 -
Glsi03g0116 674 Pfam Cyclin, N-terminal domain 135 276 IPR006671 -
Glsi03g0116 674 MobiDBLite consensus disorder prediction 579 614 - -
Glsi03g0116 674 CDD CYCLIN_AcCycT_rpt1 151 274 - -
Glsi03g0116 674 Gene3D - 125 275 - -
Glsi03g0116 674 SUPERFAMILY Cyclin-like 278 374 IPR036915 -
Glsi03g0116 674 PANTHER CYCLIN 134 409 IPR043198 GO:0006357|GO:0016538
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi03g0116 Glsi-ChrGlsi03 1599146 1616288 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi03g0116 158 284 Core Cell Cycle Gene Families AT5G27620 29.134 2.41e-06 48.1