Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi03g0083 ATGGTCTCTTCTCTGGTTTCCATTCTCACAGCTCACATGGTGTCAATGGAGGAAATTCATATGCCAATATGCCATGGATTGTTTTCCCTCATTAATAGAAAGATTTCCCTGCTCAAAATCTTGGATAGGAGAGGTGGTTTCTGTGAATTAGAGCAGGCTTGCTGGGTCTATATTGATTTTGCCTTCTTCAATACTGTGTGGATTTGCTTCCCCATTGAGACTTTTGCTTCTGTTTCTAAGTTAACTAGAGCTTATCGCTGCGGAAGGGCCATAATGGGGAAGGTCTTAGTTGAGAGACTCTTTGATGTACTGATTCTAGTGATAATCTCTGTTGTTGTTGTGAGCACTGCAGAAGCTCAGTCAAATTCGATTTTTATAAATTGTGGTTCGAATTCTACTGTGGTTGTGAATGATAGGAAATGGGTTGGGGACACGGCTCCTGATAACAATGTCACCCTTAGCTCGCCCGGTGTTGCTGCTTCCACTTCTAAATTAAGTGGCAATTCATCCTATGATCAGCTTTACAAAGCTGCCCGATTCTTCAAAGATGCTACTAATTACACAATTAAAGAAGTTAAGGGAAACTCCATTGTTAGGCTCCATTTCTGTCCCTTTGTGTTTGAGAACTACAATGTAAACGAGTCCTCATTTGCTGTTGTGGCCAATGGTCTGGCACTAGTGTCGGAATTCAATGTTCCTGCCGCTATATTGAACAGGAATATGAACTTGCAGAATGCTGGAAGTAATTCGAGTTCATTCTTCTTAATTAAGGAGTATATTCTGGCTATCAATGATGGTGTGCTTGTGATAGAATTCATCCCAACGAGAAGCTCATTTGGCTTTGTCAATGCTATAGAGATTGTCCCAATTGTGGATGGGCTTTTTCCAGACTCAGTCAACAAAGTTGGTGGAGGTGCTGAAAATTTGGCTTTGATTGGACGCGGGATGGAGACTATGTATAGGCTAAATGTTGGTGGTCCTACTGAAATTTCACCCAATCAGGATAAAGATTTTTGGAGAACTTGGGAAGTGGATTCTCACTACATGATCACAGAGAATGCTGGGTCAGGAATTAAGAACAGTTCGGCCATTACATATACTTCAAAGAATGATTCTTCAGTGGCTCCTCTCGATGTATACGAGTCTGCAAGGACGATGTCTAAAACTCAAGTCTCGGATACAAGATTTAACATGTCATGGAAATTTGAAGTGGACCCTGATTTTGAGTATATGGTCCGATTACATTTCTGTGAGCTGGAATTGGATAAGGCACACGAGAGAATTTTCAGGATCTATATTAACAACAGGACAGCAGCTGATAGCTTTGATATTTTTGTACGAGCAGGAGGGAAGAATAAAGCATATCACCAGGATTACATTGATGATGTGTCCTCAAGTTTCAACACACTTTGGGTACAATTAGGTCCTGATACTACTTCTGGTGCTGCAGGAACTGATGCACTCTTAAGCGGGCTAGAAATTTTCAAGGTCAGTCGTAATGGGAATCTTGCCCATGTGGGGATAAATGATTCAACTGGCAAATCAAAAACACGTATTCTTTGGGTGGGAGTCGGAGTAGTTCTGGCTTCTGTTGTCATTATTACATTAATAATTGTTCTAGTTTTCTGCTTTTGCAAAAGACAGAGGAAAGAATCAAGTGACATGAAAAATAACTCTCCAGGTTGGTGGCCAGTGTTTTTCTATGGGGTCACTGTAAACAGCGCTGCGAATGCCAAGGGATCAGCAGCAACTCAAAATGCATATGCATCCACCAGAGTTGGCAAGCATTTTACGTTAGCAACAATTCGTGCTGCAACAAATAATTTTGATGAGAGTTTGGTAATCGGAGTTGGAGGCTTTGGTAAGGTGTACAAGGGACAGATTGAAGATGGTGTTTATGCTGCAATCAAGCGGGCCAACCCTCTTTCTGAGCAAGGTCTGGCTGAATTTGAGACGGAGATTGAGATGCTTTCCAAACTCAGGCACAGGCATCTGGTGTCCCTGATTGGGTTCTGTGAAGAAAAGAATGAAATGATTTTGGTTTACGAGTATATGGCAAATGGTACTCTTAGAAGTCATCTATTTGGGAGTGATCTTCCACCGTTAACTTGGAAGCAGCGTCTAGAAGTGTGCATTGGTGCTGCAAGAGGACTTCATTACCTGCATACAGGATTGGATCGTGGAATAATTCACAGGGATGTCAAGACAACCAACATATTGTTAGATGAGAATTTTGTAGCCAAGATGGCTGATTTTGGGTTGTCAAAAGATGGTCCTTCTATGGAACATACCCATGTTAGTACAGCTGTGAAAGGAAGTTTTGGGTATCTAGACCCGGAGTACTTCAGACGACAGCAGCTCACGGAGAAATCAGATGTTTACTCTTTTGGGGTTGTGTTGTTTGAAGTTATTTGCGCTCGAGCTGTTATAAATCCAACCTTGCCTAAAGATCAGATCAATCTTGCAGAATGGGCGATAAAATGCCAAAGGAAGGGAAAAATTGAAACTATTATTGACCAACATCTTGAAGACTATTGTCCGGAGTCCTTGTCCATGTTTGCAGAGATAGCAGAAAAATGTCTTGCTGATGATGGGAAGGATCGGCCCACGATGGGGAAGGTGTTATGGCATTTGGAGAATGTTTTGCAACTATGTGAAGCTGGGTTAAAAACCAACAGGAGAGAGGATTCCTTTTCAAGTAGTCAAGCTTTGAAAGGACTGAAAGAGGAAGAACCAGAAGAAATAGTGGCGCCTTCAAGTCTAGATGAAGAATATGGCAATTCCACGGGAGGATTCAAAGAAATGCATGCTGCCACTTGA 2820 0.4181 MVSSLVSILTAHMVSMEEIHMPICHGLFSLINRKISLLKILDRRGGFCELEQACWVYIDFAFFNTVWICFPIETFASVSKLTRAYRCGRAIMGKVLVERLFDVLILVIISVVVVSTAEAQSNSIFINCGSNSTVVVNDRKWVGDTAPDNNVTLSSPGVAASTSKLSGNSSYDQLYKAARFFKDATNYTIKEVKGNSIVRLHFCPFVFENYNVNESSFAVVANGLALVSEFNVPAAILNRNMNLQNAGSNSSSFFLIKEYILAINDGVLVIEFIPTRSSFGFVNAIEIVPIVDGLFPDSVNKVGGGAENLALIGRGMETMYRLNVGGPTEISPNQDKDFWRTWEVDSHYMITENAGSGIKNSSAITYTSKNDSSVAPLDVYESARTMSKTQVSDTRFNMSWKFEVDPDFEYMVRLHFCELELDKAHERIFRIYINNRTAADSFDIFVRAGGKNKAYHQDYIDDVSSSFNTLWVQLGPDTTSGAAGTDALLSGLEIFKVSRNGNLAHVGINDSTGKSKTRILWVGVGVVLASVVIITLIIVLVFCFCKRQRKESSDMKNNSPGWWPVFFYGVTVNSAANAKGSAATQNAYASTRVGKHFTLATIRAATNNFDESLVIGVGGFGKVYKGQIEDGVYAAIKRANPLSEQGLAEFETEIEMLSKLRHRHLVSLIGFCEEKNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLEVCIGAARGLHYLHTGLDRGIIHRDVKTTNILLDENFVAKMADFGLSKDGPSMEHTHVSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLFEVICARAVINPTLPKDQINLAEWAIKCQRKGKIETIIDQHLEDYCPESLSMFAEIAEKCLADDGKDRPTMGKVLWHLENVLQLCEAGLKTNRREDSFSSSQALKGLKEEEPEEIVAPSSLDEEYGNSTGGFKEMHAAT 939
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi03g0083 939 PANTHER OS07G0166700 PROTEIN 595 884 IPR045272 GO:0004714|GO:0006468
Glsi03g0083 939 ProSitePatterns Protein kinases ATP-binding region signature. 615 637 IPR017441 GO:0005524
Glsi03g0083 939 Gene3D - 119 290 - -
Glsi03g0083 939 Gene3D - 315 499 - -
Glsi03g0083 939 Pfam Protein tyrosine and serine/threonine kinase 614 875 IPR001245 GO:0004672|GO:0006468
Glsi03g0083 939 Gene3D Phosphorylase Kinase; domain 1 570 684 - -
Glsi03g0083 939 FunFam receptor-like protein kinase FERONIA 572 684 - -
Glsi03g0083 939 Gene3D Transferase(Phosphotransferase) domain 1 685 903 - -
Glsi03g0083 939 ProSitePatterns Serine/Threonine protein kinases active-site signature. 729 741 IPR008271 GO:0004672|GO:0006468
Glsi03g0083 939 ProSiteProfiles Protein kinase domain profile. 609 882 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi03g0083 939 MobiDBLite consensus disorder prediction 900 939 - -
Glsi03g0083 939 Pfam Malectin-like domain 126 497 IPR024788 -
Glsi03g0083 939 FunFam Receptor-like protein kinase FERONIA 315 499 - -
Glsi03g0083 939 FunFam Receptor-like protein kinase FERONIA 685 899 - -
Glsi03g0083 939 SMART serkin_6 609 878 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi03g0083 939 CDD STKc_IRAK 615 880 - -
Glsi03g0083 939 SUPERFAMILY Protein kinase-like (PK-like) 588 879 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi03g0083 Glsi-ChrGlsi03 1109542 1112617 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi03g0083 92 924 Receptor kinase-like Gene Family AT1G30570 61.639 0.0 1050
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Glsi03g0083 Malectin_like 3.3e-35 CL0202