Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi03g0081 ATGAAGCTCTTTAGCCTTTTGGTGTTATCTTTTTCTTACTTCTCCGTTATGGGACAGCTTCCTTCCCAGGACATTTTAGCATTGCTGGAATTTAAGAAAGGTATCAAGCATGACCCTACTGGTTATGTCCTCAATTCCTGGAATGAGGAATCCATTGACTTTGATGGATGCCCATCTTCGTGGAATGGAGTTCTGTGTAATGGTGGTAATGTTGCTGGGGTTGTCCTTGATAACCAGGGTCTTTCTGCTGAAGCAGACTTGAGTGTTTTTTCAAACCTCACTAAACTTGTCAAGCTCTCCATGTCCAACAATTCCATATCAGGAAAACTTCCGGACAACATAGCTAACTTCAAAAGTCTTGAATTTCTGGATGTCTCTAATAATCTTTTCTCTTCAGCCCTACCACTTGGAATTGGCAAGTTAGCTACCTTGCAAAACCTGTCATTGGCTGGGAATAACTTCTCTGGCCCAATTCCTGACACTATTTCAGGGATGGCATCGATCCAATCTTTGGACCTGAGCCGCAACTCCTTTTCTGGAGCACTGCCAGCATCGTTGACTAGGCTGACTAGCCTGGCATCTCTTAATTTATCTCATAACAGCTTCACTGGAAAAATTCCCAAAGGTTTTGAACTGATGTCTGCTCTTGACAAGGTTGATTTGCACGGGAATATGCTTGATGGTCAATTAGATATTGAATTTATGCTTTTTTCAAGTGCCAGTTATGTTGATTTTAGTGAGAATATGCTAGTGAGTTCTAATTCCCAGCAGCAGAAATTTCTACCACGAATCTCTGAAAGTATCAAGTATTTAAATTTAAGCCACAACCAGCTTACTGGATCATTGGTTGGGGGAGGTGAGCAACCAGTTTTTGAAGACTTGAAGGTGTTGGATCTTAGCTACAATCAATTGTCTGGAGAATTGCCTGGATTTGATTTTGTTTATGAGCTTCAGGTCCTAAAGCTTAGCAACAACAGATTTTCAGGATTTATTCCAAATGGCCTACTAAAAGGAGACTCATTGGTTTTAACTGAGCTAGATTTGAGCGCCAACAATCTCTCAGGGCCAATAGGTATAATTACAACAACAACACTGTACTATCTTAATCTCTCATCAAATGGTTTCACTGGCGAGCTGCCACTTCTCACAGGAAGCTGTGCTGTACTTGATTTGTCAAATAACAAATTAGAAGGCAATTTAACCAGGATGCTGAGATGGGGGAATATAGAATTTCTTGATCTCAGTAGTAATCATTTGACTGGGCCCATCCCTGAGATCACTCCTCAGTTCTTACGGTTAAATTATCTGAATCTCTCCCATAATTCTCTTAGCAGCTTCCTCCCAAGAGTCTTAACACAGTATCCGAAGCTTAGAGTGCTTGATGTTAGCTCCAACCAGTTTGACGGACTACTTCCAGCTAATCTGCTCGATATGCCTACTTTGCAAGAGCTCCATCTTGAAAATAATATGATTTCTGGTAACATTAATCTGTCATCCTCCCCTGGTCAATCTGATCTTCAGATTCTTGATCTTTCTCACAACCAATTTAATGGCTATTTTCCTGAAGAATTTGGATCTCTAACTGGCCTGAAAGTGCTCAACATTGCTGGAAATAATTTTTCTGGTTCTCTTCCAACTACCATTGCTGACATGAGTTCACTAGACTCCTTGGATATATCAGAGAATCATTTTACAGGTCCATTACCAACTAACTTGCCAAAGGGACTCGAAAACTTTAATGCCTCTAACAATTATCTGTCTGGAAATGTTCCTGAAAATCTTAGGAAGTTCCCTAATTCTTCTTTCTACCCTGGGAATGCTAAGTTGCATTATCCAAATGGTCCTCCTGGATCAACCGGTATGCCAGCTGAAAGTTCCAATAGGAAGCCTATGAGCACTATCATCAAAGTAATAATTATAGTGTCATGTGTGATTGCTCTATTCATATTAATCCTTCTTGCAATTTTCATACATTACATACGAATATCAAGACCTTCACCAGAATTAGCTACAAGTAAGGATATTCATGGTCAAGCTCAACCAAACGTAGCTGGCACTGGCCGTGCAACAGACAGGGGTGGTGCTTTGGTTGTATCAGCTGAGGATCTTGTGACCTCACGGAAAGGATCATCGTCAGAGGTAATCAGCCCTGATGAAAAATTGGCAGCTATAACTAGTTTGTCCCCATCAAAAAACAGTCACTTTTCATGGTCACCAGGGTCTGGTGATTCATTCACTGCTGAAAGTTTTGCAAGATTAGATGTGAGATCACCAGATAGGTTGATTGGCGAGCTGCATTTTCTCGATGATACAATAACATTAACGCCTGAGGATCTTTCAAGGGCCCCAGCTGAAGTTTTGGGGAGAAGCAGTCATGGTACTTCGTATAAGGCTACTCTGGAGAATGGTCTATTATTGAGAGTGAAGTGGTTGAGAGAAGGAGTGGCAAAACAGAGAAAAGAATTTGCGAAAGAGGCTAAAAAGTTTGCAAACATCAGGCATCCAAATGTTGTGGGATTGAGAGGATATTATTGGGGTCCTACACAGCATGAGAAGCTTATTCTTTCAGATTACATTTCTCCTGGAAGTCTTGCAAGTTTTCTATATGATCGACCAGGAAGAAAAGGTCCCCCATTAACCTGGGCCCAAAGGCTCAAAATAGCAGTTGATGTAGCACGTGGCCTGAACTATCTCCATTTTGATCGTGCTGTTCCTCATGGGAACCTCAAAGCAACAAATGTGTTGTTAGATACAGCTGATTTGAATGCACGAGTTGCTGATTACTGCCTCCACCGGCTTATGACTCAGGCTGGTACTACTGAACAGATTCTTGATGCTGGGGTTTTGGGATATCGGGCACCAGAATTAGCTGCTTCCAAGAAGCCAATGCCCTCCTTTAAGTCAGATGTTTATGCTTTTGGAGTGACACTTCTGGAACTTTTAACTGGAAGGTGTGCCGGTGATGTGATATCTGGTGAGGAGGGAGGTGTTGATTTGACAGATTGGGTAAGGTTGCGGGTTGCAGAGGGTCGAGGCTCAGAATGTTTTGATGCTGCATTGATGCCAGAAATGGGTATTCCAATTGCAGAAAAGGGAATGAAGGATTTCCTAGGAATAGCTCTGCGATGTATACGATCTGTTTCTGAGAGGCCAGGTATCAAGACTATATATGAAGATCTCTCATCTATATAG 3192 0.417 MKLFSLLVLSFSYFSVMGQLPSQDILALLEFKKGIKHDPTGYVLNSWNEESIDFDGCPSSWNGVLCNGGNVAGVVLDNQGLSAEADLSVFSNLTKLVKLSMSNNSISGKLPDNIANFKSLEFLDVSNNLFSSALPLGIGKLATLQNLSLAGNNFSGPIPDTISGMASIQSLDLSRNSFSGALPASLTRLTSLASLNLSHNSFTGKIPKGFELMSALDKVDLHGNMLDGQLDIEFMLFSSASYVDFSENMLVSSNSQQQKFLPRISESIKYLNLSHNQLTGSLVGGGEQPVFEDLKVLDLSYNQLSGELPGFDFVYELQVLKLSNNRFSGFIPNGLLKGDSLVLTELDLSANNLSGPIGIITTTTLYYLNLSSNGFTGELPLLTGSCAVLDLSNNKLEGNLTRMLRWGNIEFLDLSSNHLTGPIPEITPQFLRLNYLNLSHNSLSSFLPRVLTQYPKLRVLDVSSNQFDGLLPANLLDMPTLQELHLENNMISGNINLSSSPGQSDLQILDLSHNQFNGYFPEEFGSLTGLKVLNIAGNNFSGSLPTTIADMSSLDSLDISENHFTGPLPTNLPKGLENFNASNNYLSGNVPENLRKFPNSSFYPGNAKLHYPNGPPGSTGMPAESSNRKPMSTIIKVIIIVSCVIALFILILLAIFIHYIRISRPSPELATSKDIHGQAQPNVAGTGRATDRGGALVVSAEDLVTSRKGSSSEVISPDEKLAAITSLSPSKNSHFSWSPGSGDSFTAESFARLDVRSPDRLIGELHFLDDTITLTPEDLSRAPAEVLGRSSHGTSYKATLENGLLLRVKWLREGVAKQRKEFAKEAKKFANIRHPNVVGLRGYYWGPTQHEKLILSDYISPGSLASFLYDRPGRKGPPLTWAQRLKIAVDVARGLNYLHFDRAVPHGNLKATNVLLDTADLNARVADYCLHRLMTQAGTTEQILDAGVLGYRAPELAASKKPMPSFKSDVYAFGVTLLELLTGRCAGDVISGEEGGVDLTDWVRLRVAEGRGSECFDAALMPEMGIPIAEKGMKDFLGIALRCIRSVSERPGIKTIYEDLSSI 1063
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi03g0081 1063 Gene3D Phosphorylase Kinase; domain 1 772 858 - -
Glsi03g0081 1063 Pfam Leucine rich repeat N-terminal domain 22 67 IPR013210 -
Glsi03g0081 1063 SUPERFAMILY RNI-like 219 426 - -
Glsi03g0081 1063 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 382 614 - -
Glsi03g0081 1063 ProSiteProfiles Protein kinase domain profile. 781 1063 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi03g0081 1063 SUPERFAMILY RNI-like 87 586 - -
Glsi03g0081 1063 ProSiteProfiles Leucine-rich repeat profile. 293 315 IPR001611 GO:0005515
Glsi03g0081 1063 SMART LRR_typ_2 291 313 IPR003591 -
Glsi03g0081 1063 SMART LRR_typ_2 551 575 IPR003591 -
Glsi03g0081 1063 SMART LRR_typ_2 165 188 IPR003591 -
Glsi03g0081 1063 SMART LRR_typ_2 454 478 IPR003591 -
Glsi03g0081 1063 SMART LRR_typ_2 527 550 IPR003591 -
Glsi03g0081 1063 SMART LRR_typ_2 189 212 IPR003591 -
Glsi03g0081 1063 SMART LRR_typ_2 93 116 IPR003591 -
Glsi03g0081 1063 SMART LRR_typ_2 117 141 IPR003591 -
Glsi03g0081 1063 SMART LRR_typ_2 314 338 IPR003591 -
Glsi03g0081 1063 SMART LRR_typ_2 430 453 IPR003591 -
Glsi03g0081 1063 Pfam Leucine rich repeat 412 467 IPR001611 GO:0005515
Glsi03g0081 1063 Pfam Leucine rich repeat 506 564 IPR001611 GO:0005515
Glsi03g0081 1063 PANTHER OS07G0626500 PROTEIN 6 1063 - -
Glsi03g0081 1063 SUPERFAMILY Protein kinase-like (PK-like) 784 1060 IPR011009 -
Glsi03g0081 1063 FunFam Leucine-rich repeat receptor-like protein kinase 766 858 - -
Glsi03g0081 1063 FunFam Pollen receptor-like kinase 1 859 1063 - -
Glsi03g0081 1063 Gene3D Ribonuclease Inhibitor 23 140 IPR032675 -
Glsi03g0081 1063 Gene3D Ribonuclease Inhibitor 256 618 IPR032675 -
Glsi03g0081 1063 FunFam LRR receptor-like serine/threonine-protein kinase GHR1 20 265 - -
Glsi03g0081 1063 Gene3D Transferase(Phosphotransferase) domain 1 860 1063 - -
Glsi03g0081 1063 Gene3D Ribonuclease Inhibitor 141 255 IPR032675 -
Glsi03g0081 1063 Pfam Protein tyrosine and serine/threonine kinase 785 983 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi03g0081 Glsi-ChrGlsi03 1088824 1092958 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi03g0081 1 1051 Receptor kinase-like Gene Family AT1G55610 27.842 4.41e-80 283
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Glsi03g0081 PK_Tyr_Ser-Thr 7.1e-29 CL0016