Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi03g0032 ATGATATTCGCACAAGAAAAGATGGAGAAGCTGTTCCATAGATATAAGGTGGGGGTGGGCCCGTGGAGGTCGTCGAGGGACGTCACAGCACCGGGGGGTGGACCAGGGGTTCAAGTGACGATGGAGATGTGGGTGGTACTTGTGGCCATTTTGGGTGCTGTTTTGCTGCTCAAATCCCTCCTCAAGAATGCAAATCGGTGGCTCTATGAAACCCAGTTGGGTGAAAAGCAGTACTCTTTGCCCCCTGGAGATTTGGGATGGCCCTTCGTTGGTAATATGTGGTCCTTCCTTAGAGCTTTCAAGTCCACTGACCCTGATTCCTTCATCTCCTCCTTTGTCTCCAGATATGGACGAACTGGAATATACAAGCTTATGATGTTTGGGAGCCCAAGTGTTGTAGTGACGACACCAGAAACATGCAGAAGAGTTTTGACGGATGATGATAAATTTACAACCGGTTGGCCTCGTTCCACCATAGAGTTGATTGGGAAGAAATCCTTCATTTCAATTTCTTATGAGGAACATAAGCGTCTTAGGCGTTTGACATCTTCTTCCATCAATGGCATGGAAGCTCTATCCTTGTACTTGACATACATTGAAGAAAATGTCAAAACTTCCTTGGACAAGTGGTCCAACATGGGAGCAATCGAGTTCTTAACTCACCTTCGCAAGCTCACTTTCAAGATCATTATGCATATCTTCCTCAGCTCAGAGAGTGAATTTGTCATGGAAGCTCTCGAGAGGGAATATACAACCCTTAATTATGGAGTTAGAGCCATGCGAATTAATCTTCCTGGATTCGCATACCACAAAGCACTTAAAGCTAGAAAAAAACTGGTGGCTATATTCCAGTCTATTGTGAATGAGAGAAGAAAGCACAAGAAGGAAAAATCAGGGAGAGAAACAAAAGACATGATGGATGCCCTCATGGATGTTGAAGATGAAAGCGGAAGAAAACTGGGCGATGAGGAAATCATTGATGTTATGATAATGTACTTGAACGCAGGTCATGAATCTTCTGGACATATCACCATGTGGGCTACCGTGTTACTTCAAAAGCACCCAGAATATTTGCAAAAGGCTAAGGCAGAGCAGGAAGAAATCTTGAGGAAAAGGCCACCAACTCAGAAAGGGTTGACGCTTAAAGAGTTTCGGCAGATGGAATATCTTTATCAGGTGATTGATGAAACAATGCGTTTGATTACATTCTCATTGGTAGTGTTTCGCGAGGCGAAATCGGATGTCAATATTAATGGTTACACCATCCCGAGAGGTTGGAAAGTGTTGGTGTGGTTCAGGAGTGTTCACCTTGATCCTGAAATATATCCCAATCCAAAGGAGTTTAATCCTTCTAGATGGGAAGGCTCCACACACAAGTCCGGAGAATTCCTCCCCTTCGGAGCTGGATCTAGATTATGTCCTGGAAATGATCTCGCCAAGATGGAAATTGCAGTTTTCCTCCATCATTTTCTTCTTAACTACGAGCTTGAACAGCTTAATCCTAAATGCCCAGTGAGATACTTACCGCACACGAGGCCCGTGGACAATTGCTTGGCAAGAGTCAAGAAACGTTCATCTACCTCAACCTAAAACTGGCATGCTCCTCCAGATTCAGAATCTGCTGCCAACGTGGTGTTAAAGGGAATGGAAAAGTGGGTTCAGGTTAAAATTCATATGGGTCTGAGGAGCACTGTACCTGGCAAAATTGGCATAGAAATGGCGAAATTTTCGGTTGGTGGGGATGACGATGGGGAAGGGCCCAGCAACCCAACCCAAAAGCGACGCAGGATTACTGTTAGCTGCCGTACCGTCGGGGAAGACGGACGAGAAGACGTTGAGAACCAAAGTGGAACAGAAGACGAAGGAGATGATTCTCAGCAGCACCTTGAAGTGGTACCAAGTGTCGCAGATGATCATGATTCATTTATCGAAGATTATGATGAATTCGATTATTTTAGAGCCAGATCGAACGTTAGCGGTAGAGAGAACAATGTTTCCGCTAAGGATAGTAGGGATAGGTCCGTTTCTGTCACCCTTACCGACCCTGATGTGCTTGATTGCTGCATTTGCTATGAACCCTTGAGTACACCTATCTTCCAGTGCGAGAATGGGCATATTGCTTGCTCGTCCTGCTGTGTCAAACTTGGTAATAAGTGTCCCATGTGCTCAATGCCCATTGGCTATAACCGTTGCCGAGCCATTGAGAAAGTGTTGGACTCTGTTAAGATATCATGCTTAAATGCAAAATATGGTTGTAAAGAGACAGTGAGTTACAGTAAGAAAAATAACCATGAGAAAGAATGCATTTACGCACCGTGTATATGCCCTTATTCTGGTTGCGACTTTGTTGCCTCATCCAAGGAGTTGTCCCTCCACTTCAGCTGTAAACATGTGGGTTCTGCAATACATTTTACATATGATCGCTTTTTCTCTGTGTTCTTAAAGGTCGACGACAAAGTCATTGTTCTTCAGGATCTGAATGATGCTAATCTATTCATGCTCAACAACAATGTCGAGCTTCTGGGGAATATAGTCAATGTTAGTTGCATTGGCCCCAACTCCTTGAAGACAGTGTTTCATTATGATATTTTGGCTAGATCTCAGGGAAACTGTCTAAAATTACAATCTTTTGCCAAGATCAATCAAGGCCGCAATGCCAATACTGCTTCAACAGGGTTCCTATTGATTCCATGTGATTTTTTTGGTTCTTGTGGACAGCTCAAACTGGACATTCGTATAAGGTGCAATGTTACACGTCCTACAGATGTTCAAAGTTCTTAG 2781 0.4394 MIFAQEKMEKLFHRYKVGVGPWRSSRDVTAPGGGPGVQVTMEMWVVLVAILGAVLLLKSLLKNANRWLYETQLGEKQYSLPPGDLGWPFVGNMWSFLRAFKSTDPDSFISSFVSRYGRTGIYKLMMFGSPSVVVTTPETCRRVLTDDDKFTTGWPRSTIELIGKKSFISISYEEHKRLRRLTSSSINGMEALSLYLTYIEENVKTSLDKWSNMGAIEFLTHLRKLTFKIIMHIFLSSESEFVMEALEREYTTLNYGVRAMRINLPGFAYHKALKARKKLVAIFQSIVNERRKHKKEKSGRETKDMMDALMDVEDESGRKLGDEEIIDVMIMYLNAGHESSGHITMWATVLLQKHPEYLQKAKAEQEEILRKRPPTQKGLTLKEFRQMEYLYQVIDETMRLITFSLVVFREAKSDVNINGYTIPRGWKVLVWFRSVHLDPEIYPNPKEFNPSRWEGSTHKSGEFLPFGAGSRLCPGNDLAKMEIAVFLHHFLLNYELEQLNPKCPVRYLPHTRPVDNCLARVKKRSSTSTXNWHAPPDSESAANVVLKGMEKWVQVKIHMGLRSTVPGKIGIEMAKFSVGGDDDGEGPSNPTQKRRRITVSCRTVGEDGREDVENQSGTEDEGDDSQQHLEVVPSVADDHDSFIEDYDEFDYFRARSNVSGRENNVSAKDSRDRSVSVTLTDPDVLDCCICYEPLSTPIFQCENGHIACSSCCVKLGNKCPMCSMPIGYNRCRAIEKVLDSVKISCLNAKYGCKETVSYSKKNNHEKECIYAPCICPYSGCDFVASSKELSLHFSCKHVGSAIHFTYDRFFSVFLKVDDKVIVLQDLNDANLFMLNNNVELLGNIVNVSCIGPNSLKTVFHYDILARSQGNCLKLQSFAKINQGRNANTASTGFLLIPCDFFGSCGQLKLDIRIRCNVTRPTDVQSS 926
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi03g0032 926 Pfam Cytochrome P450 81 501 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi03g0032 926 Pfam Seven in absentia protein family 730 885 IPR018121 GO:0005737|GO:0006511|GO:0007275
Glsi03g0032 926 ProSiteProfiles Zinc finger SIAH-type profile. 740 798 IPR013010 GO:0008270
Glsi03g0032 926 CDD RING-HC_SIAHs 685 723 - -
Glsi03g0032 926 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 735 793 IPR013083 -
Glsi03g0032 926 SUPERFAMILY Cytochrome P450 77 524 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi03g0032 926 CDD CYP90-like 113 523 - -
Glsi03g0032 926 FunFam Ent-kaurenoic acid oxidase 71 524 - -
Glsi03g0032 926 SUPERFAMILY TRAF domain-like 740 913 - -
Glsi03g0032 926 Gene3D Cytochrome P450 70 524 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi03g0032 926 PRINTS E-class P450 group I signature 431 455 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi03g0032 926 PRINTS E-class P450 group I signature 473 496 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi03g0032 926 PRINTS E-class P450 group I signature 463 473 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi03g0032 926 PRINTS E-class P450 group I signature 344 370 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi03g0032 926 PANTHER CYTOCHROME P450 26 77 511 - -
Glsi03g0032 926 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 466 475 IPR017972 GO:0005506|GO:0016705
Glsi03g0032 926 ProSiteProfiles Zinc finger RING-type profile. 687 723 IPR001841 -
Glsi03g0032 926 MobiDBLite consensus disorder prediction 576 626 - -
Glsi03g0032 926 PRINTS P450 superfamily signature 464 473 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi03g0032 926 PRINTS P450 superfamily signature 335 352 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi03g0032 926 PRINTS P450 superfamily signature 473 484 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi03g0032 926 PRINTS P450 superfamily signature 392 403 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi03g0032 Glsi-ChrGlsi03 376845 389908 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi03g0032 43 523 Cytochrome P450 AT2G32440 70.270 0.0 725