Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi02g3924 ATGAACCACATCAAACAATTGGGCATCAACTTTTACAATAATCGTCTTCCCCCTTCCTTGCAAACTCCAACAATATTGAAAGCAGAGGCAGGTATGACTGGGATGGTCATAGACCAGACTACGGCAGTCAGGAATTTGGCAATCTTTTCTGCTTTAGTAAATTTAGAGTATGTTAATGGATATCTATTGCTGCAGCTTGAGAAGCTCAGTGACATACAGTGTCAGCCTGAGTCACAGCTAAAATTTATAACAGAGGCTTGGTTACAGATTGTTGAATGCAGACGTGTTTTGAAATGGACATATGCCTATGGCTACTATTTACCTGAGCATGAGAATGCTAAGAGACAGTTTTTTGAATACTTGCAAGGTGAAGCTGAGTCTGGATTGGAACGACTGCATCAGTGTGCTGAGAAGGAATTGCAAGTTCACCTTAATGAAGAGGGTCCATCAAAAGATTTTAACGAATTCCGCACAAAACTTGCTGGACTAACCAGTGTGACACGCAACTACTTTGAGAATTTGGTACAAGCTTTGGAGAATGGTTTATCAGATGTAGCCTCTCACGGTGCAAGCAGCAGGACAGCAAACTCAAAGAGCCTAGGCAGTGGAAGCTACAATGGGAGAGGAGGGAGGGGGAAGGGTACAGCATCCAGATCTTGTAGTTCCAGAAGTATTGATGATTTGGGCCACTGGTCATGCGATCATTGCACATATGCAAATGTAAAGTCAACTAGTATTTGTCAGATGTGCCACCAGCATCGGTAA 765 0.4288 MNHIKQLGINFYNNRLPPSLQTPTILKAEAGMTGMVIDQTTAVRNLAIFSALVNLEYVNGYLLLQLEKLSDIQCQPESQLKFITEAWLQIVECRRVLKWTYAYGYYLPEHENAKRQFFEYLQGEAESGLERLHQCAEKELQVHLNEEGPSKDFNEFRTKLAGLTSVTRNYFENLVQALENGLSDVASHGASSRTANSKSLGSGSYNGRGGRGKGTASRSCSSRSIDDLGHWSCDHCTYANVKSTSICQMCHQHR 254
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi02g3924 254 Gene3D - 54 185 - -
Glsi02g3924 254 ProSiteProfiles Zinc finger RanBP2 type profile. 227 254 IPR001876 -
Glsi02g3924 254 SUPERFAMILY Ran binding protein zinc finger-like 229 254 IPR036443 -
Glsi02g3924 254 SMART zf_4 229 253 IPR001876 -
Glsi02g3924 254 MobiDBLite consensus disorder prediction 186 219 - -
Glsi02g3924 254 ProSitePatterns Zinc finger RanBP2-type signature. 231 250 IPR001876 -
Glsi02g3924 254 Gene3D - 226 254 - -
Glsi02g3924 254 MobiDBLite consensus disorder prediction 186 204 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi02g3924 Glsi-ChrGlsi02 85383305 85386803 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi02g3924 65 254 ARIADNE family AT1G65430 70.526 3.74e-86 265