Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi02g3913 ATGGGGTCCTGCTTCTCTGCGGAAAGCAGGAGCCCACTTCCCACTTCACCTTCGGGTATCAGGAAACGGAAGAACTCAAGGAACGGACTGGGATCTCGAAGTTCTTCCTTGGACTATTGGAGGGATGAACCCCTCCATAGAATTCCAGGGAGGATGTTTCTAAATGGGTCTAGTGAAGTTGCGTCCTTGTTTACTCAACAAGGCAAGAAAGGCACCAATCAAGATGCCATGATTGTTTGGGAGAATTTTTGCTCTAGAAAAGATACAATTTTTTGTGGAGTTTTTGATGGCCATGGTCCATTTGGTCATATGGTTGCGAAAAGAGTGAGGGATTCTCTTCCTCTAAAACTGAGTGCACATTGGGAACTTAATGTAACTGGTGAGGAAATCCTCAAGGGGATTAGCATTAATACTACAGGAAGCATGAACTCAGAAGAGGCTGCCTTTGTATCTGCTGATGAAGAATCTAGGGCATCCATTGATGCTGAGGAAATTGAAAAACACCCTGAGATCTTTCGAACACTTAAAGAGTCATTTTTAAAGGCATTTAGTGTTATGGACAGGGAACTGAAGGTGCACCCAAGTATTGATTGCTTTTGCAGTGGGACTACCGCTGTAACTCTAGTTAAGCAGGGTCAAGATCTAGTTATTGGAAATGTGGGCGACTCTAGAGCTGTGCTAGGTACAAGAGACAAAGATGATTCTCTTGTAGCAGTCCAGTTAACTGTGGATCTTAAACCCAATCTTCCAGCTGAAGCAGAGAGAATCCGCAAATGTAAAGGGCGTGTTTTTGCTCTTCAGGATGAACCTGAGGTTGCCCGAGTCTGGTTGCCAAACAATGACTCCCCTGGCTTAGCCATGGCGCGGGCATTTGGAGACTTCTGTCTTAAAGATTTTGGTCTGATATCTGTTCCAGAGATATCCTACCATCGCCTCACTGAGAAGGATGAATTTGTTGTTCTGGCAACAGATGGGATTTGGGATGTGCTCTCAAACAAAGAAGTTGTTGACATCATAGCAGCAGCCGGAGTACGTTCCTCTGCAGCTCGAGCATTGGTTGAGTCAGCAGTGCGATCTTGGAGATATAAATACCCGACTTCTAAAGTGGACGATTGTGCTGTGGTTTGCCTCTTCCTTGACTCAGACTCACCTAAATTATCTAGTGCTTCTCATACCAATTGCAAAGAGCAGCCTAATTCAGGAAAACAAGTCAACCCAGGTGATAGGGAAGATCTTTCCGGACCTACTGTTCTGGAAAGGTCAGGAACTTGCCGAGCAAGCAATGGGAACTCCCAGGAAGAAAGCGATGATGAAGTAGCAAAGGAGGAGGAGATAGACGCTGAGTCAGAAAAAGATTGGTCTGCTCTTGAAGGAGTATCTCGTGTAAACACATTATTAAATCTCCCAAGATTTGTCCCCGGGGAAGACGACAAAGCTGCGGCAGGGATGAGGAGGCGCAAATGA 1464 0.4549 MGSCFSAESRSPLPTSPSGIRKRKNSRNGLGSRSSSLDYWRDEPLHRIPGRMFLNGSSEVASLFTQQGKKGTNQDAMIVWENFCSRKDTIFCGVFDGHGPFGHMVAKRVRDSLPLKLSAHWELNVTGEEILKGISINTTGSMNSEEAAFVSADEESRASIDAEEIEKHPEIFRTLKESFLKAFSVMDRELKVHPSIDCFCSGTTAVTLVKQGQDLVIGNVGDSRAVLGTRDKDDSLVAVQLTVDLKPNLPAEAERIRKCKGRVFALQDEPEVARVWLPNNDSPGLAMARAFGDFCLKDFGLISVPEISYHRLTEKDEFVVLATDGIWDVLSNKEVVDIIAAAGVRSSAARALVESAVRSWRYKYPTSKVDDCAVVCLFLDSDSPKLSSASHTNCKEQPNSGKQVNPGDREDLSGPTVLERSGTCRASNGNSQEESDDEVAKEEEIDAESEKDWSALEGVSRVNTLLNLPRFVPGEDDKAAAGMRRRK 487
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi02g3913 487 PANTHER PROTEIN PHOSPHATASE 36 377 IPR015655 GO:0004722|GO:0006470
Glsi02g3913 487 MobiDBLite consensus disorder prediction 384 406 - -
Glsi02g3913 487 Gene3D - 56 381 IPR036457 -
Glsi02g3913 487 ProSiteProfiles PPM-type phosphatase domain profile. 60 379 IPR001932 -
Glsi02g3913 487 FunFam probable protein phosphatase 2C 33 55 382 - -
Glsi02g3913 487 CDD PP2Cc 60 379 IPR001932 -
Glsi02g3913 487 SMART PP2C_4 49 377 IPR001932 -
Glsi02g3913 487 MobiDBLite consensus disorder prediction 384 452 - -
Glsi02g3913 487 SUPERFAMILY PP2C-like 53 380 IPR036457 -
Glsi02g3913 487 Pfam Protein phosphatase 2C 170 358 IPR001932 -
Glsi02g3913 487 MobiDBLite consensus disorder prediction 1 35 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi02g3913 Glsi-ChrGlsi02 85283572 85288224 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi02g3913 1 475 PP2C-type Phosphatase Gene Family AT3G02750 62.619 0.0 613