Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi02g3888 ATGAGATTGATAACGGAAGAGGGAGGAGACCACCGCCTTCTGATTCAGCCGCCGAATTTCTCCATGGTTGAGGACGGCATTTTTCGATCCAGCTTCCCTCAACCTTCTCATTTTCCCTTCCTTCAAACCCTAAATCTTCGATCCATCATATACTTGTGTCCCGAACCATATCCGCAAGAAAATTTGGAGTTTCTTCGGTCTCAGGATATTCGGCTCTTTCAATTTGGAATTGAGGGGAAGACGGAGCTTTCTGTACCTATTCTCAGGGATACCATCATGGATGCTTTGAAAGTTTTAATTGATGTGAGAAATCACCCAGTTTTGATACATTGCAAACGAGGAAAGCATCGAACAGGTTGCCTGGTTGGTTGCTTGAGGAAATTGCAGAATTGGTGTTTGTCTTCTGTGTTTGAGGAGTACCAGAGATTTGCTGGTGCTAAATCCCGCGTAGCGGATTTAAAATTTATAGAAACATTTGACATCTTATGCCTGAGGCAGTGCCTTTACAGCATCATATACCAGTACCAAGGATATAATTCAAAGAAGAGGCGGTTATTGTATAGAGAAGAGAATTTACAGAAGCCCCCCGTGACGTCAGTTTAG 603 0.4312 MRLITEEGGDHRLLIQPPNFSMVEDGIFRSSFPQPSHFPFLQTLNLRSIIYLCPEPYPQENLEFLRSQDIRLFQFGIEGKTELSVPILRDTIMDALKVLIDVRNHPVLIHCKRGKHRTGCLVGCLRKLQNWCLSSVFEEYQRFAGAKSRVADLKFIETFDILCLRQCLYSIIYQYQGYNSKKRRLLYREENLQKPPVTSV 200
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi02g3888 200 ProSiteProfiles Dual specificity protein phosphatase domain profile. 19 184 IPR020422 GO:0006470|GO:0008138
Glsi02g3888 200 FunFam probable tyrosine-protein phosphatase At1g05000 13 163 - -
Glsi02g3888 200 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 15 160 IPR029021 -
Glsi02g3888 200 PRINTS Plant and fungal dual specificity phosphatase signature 70 84 IPR020428 GO:0016791
Glsi02g3888 200 PRINTS Plant and fungal dual specificity phosphatase signature 14 31 IPR020428 GO:0016791
Glsi02g3888 200 PRINTS Plant and fungal dual specificity phosphatase signature 51 64 IPR020428 GO:0016791
Glsi02g3888 200 PRINTS Plant and fungal dual specificity phosphatase signature 87 101 IPR020428 GO:0016791
Glsi02g3888 200 Pfam Tyrosine phosphatase family 14 161 IPR004861 -
Glsi02g3888 200 PANTHER TYROSINE-PROTEIN PHOSPHATASE 14 173 - -
Glsi02g3888 200 CDD PFA-DSP_Siw14 13 160 - -
Glsi02g3888 200 ProSitePatterns Tyrosine specific protein phosphatases active site. 109 119 IPR016130 GO:0016311|GO:0016791
Glsi02g3888 200 Gene3D Protein tyrosine phosphatase superfamily 13 163 IPR029021 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi02g3888 Glsi-ChrGlsi02 85141664 85143548 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi02g3888 7 195 Protein tyrosine phosphatase (PTP) family AT3G02800 69.110 4.54e-99 283