Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi02g3857 ATGGAACCCAATGAAAACCAGCTTAGCTCCTACTTCCTCCACCAACAGCAGCAAAGCACCACCTCTACCATCGCACCAACAACCGCCGTCACCACCACATCCTCGCCAACCAATGGACTCTTTCCAAACGCTGATGGGTCCCACATGGTCTACCCTCATTCTGTGCCCTCTGCGGTGTCCTCTCAACTTGAACTGCCAAAGAGGAAGAGAGGGAGGCCAAGGAAGTACGGCACCCCTGAGCAAGCTCTAGCCGCGAAGAAAGCTGCTACGTTGTCGTCCCACTCCTTCTCTCCCAAGGACAAGAAGGACCACGGTTTGGGCAGTACCTCTGCTTCGTCTTCTTATACCGGCGCCTCGAAGAAATCTCAGTCGTTTGCTCTAGGCAATGCAGGACAGGGCTTCACCCCACATGTCATCACTGTTGCTTCTGGTGAGGATGTCGGCCAGAAAATCATGTTGTTCATGCAACAAAGTAGGCGTGAAATGTGCATTCTGTCTGCATGTGGTTCCATCTCTAATGTCTCTCTCCGACAGCCAGCCACCTCAGGAGGCAATATAACATATGAGGGTCGGTTTGAGATAATTTCACTATCTGGTTCCTATGTCCGTACTGAACTAGGAGGGCGCACTGGGGGCCTTAGTGTATGCTTATCTAATTCTGATGGGGAAATCGTAGGTGGAGGAGTTGGTGGACCCCTAAAAGCTGCTGGTCCAGTTCAGGTGATTGTCGGTACCTTTTTTATGGACACCAAGAAGGATGCTGGTGTAGGTGTAAAAGGTGATGCTTCTGGCAGCAAGTTGCCATCACTGGTTGGGGAATCAGTATCAAGTCTAGGTTTCCATCAGGCAGCAGCAGTTGAATCTTCCAGTGGGAATCCAATTCGGGGAAACGACGATCATCAAGGCATTGGAGGAAGTCATTTCATGATTCAACAGCGTGGCGTGCATGTGACACCTGCGCAGCCCACAGACTGGGGGGGTCGTCCTGGCTATGAACTTACAGGAAGAACAGGGGATGGGCATGGAGCGCACCACTCTCCCGAGAATGGGGACTACTAA 1059 0.5175 MEPNENQLSSYFLHQQQQSTTSTIAPTTAVTTTSSPTNGLFPNADGSHMVYPHSVPSAVSSQLELPKRKRGRPRKYGTPEQALAAKKAATLSSHSFSPKDKKDHGLGSTSASSSYTGASKKSQSFALGNAGQGFTPHVITVASGEDVGQKIMLFMQQSRREMCILSACGSISNVSLRQPATSGGNITYEGRFEIISLSGSYVRTELGGRTGGLSVCLSNSDGEIVGGGVGGPLKAAGPVQVIVGTFFMDTKKDAGVGVKGDASGSKLPSLVGESVSSLGFHQAAAVESSSGNPIRGNDDHQGIGGSHFMIQQRGVHVTPAQPTDWGGRPGYELTGRTGDGHGAHHSPENGDY 352
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi02g3857 352 SUPERFAMILY AF0104/ALDC/Ptd012-like 132 247 - -
Glsi02g3857 352 MobiDBLite consensus disorder prediction 333 352 - -
Glsi02g3857 352 ProSiteProfiles PPC domain profile profile. 130 271 IPR005175 -
Glsi02g3857 352 Gene3D - 136 260 - -
Glsi02g3857 352 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 22 265 IPR039605 GO:0003680
Glsi02g3857 352 MobiDBLite consensus disorder prediction 29 116 - -
Glsi02g3857 352 MobiDBLite consensus disorder prediction 338 352 - -
Glsi02g3857 352 CDD DUF296 135 246 IPR005175 -
Glsi02g3857 352 Pfam Plants and Prokaryotes Conserved (PCC) domain 136 246 IPR005175 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi02g3857 Glsi-ChrGlsi02 84907516 84913367 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi02g3857 26 352 AT-hook Motif Nuclear Localized (AHL) Family AT3G04590 51.913 1.51e-93 283