Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi02g3854 ATGTCTATGAATGAGAGTGCAGCAGCAATTGCGAACAGCAGGGTTCAAGAGATTAATAGTGACCAAGAAGGGGCTATGACCAGTCGCCGTCCCAGAGGCCGTCCGCGGGGCTCAAAGAACAAACCGCACCAGCCCATATATGTGTGCTTAACCGACACACCAAATGCACTGCAAAGCCATGTCATCGAGATAGCAAACGGAGCCGACATTCTTGGGACCCTGCTTCAGTTCGCCACAAGACGGCAACTGGGTCTCTGCATTCTCGGCGGCAGCGGCACCGTGTTCAATCCCATTCTACGCCACCCATCGGTACCCGGTGCCAACATGCCACTTACAGGCCTCTTCCATATACTACATTTAACGGGTTCCTATGTGGAACCGCAAGCACCTGGTTTAATGGGTCTAACGCTGAGCATTTGCATGACCGCAAGGCAGGGAATAGTGGTTGGCGGTGAGGTGGAGGGTCCGCTCCACGCATCAGGACCCGTTATCATAACCGCAGCTACGTTTTCGGGTGCAAACCATGAGAGATTAGGCATTGAGCCATCTGGGTCCGCCGACACCGTCCGGGCCTCCCCCTCCATTCCGCTTTATAATAATCTTCCTCCCAACTATTGGGAAAATTTGTTGAACGGTAACATTGACGAAGAAAGATACAATTAA 663 0.5234 MSMNESAAAIANSRVQEINSDQEGAMTSRRPRGRPRGSKNKPHQPIYVCLTDTPNALQSHVIEIANGADILGTLLQFATRRQLGLCILGGSGTVFNPILRHPSVPGANMPLTGLFHILHLTGSYVEPQAPGLMGLTLSICMTARQGIVVGGEVEGPLHASGPVIITAATFSGANHERLGIEPSGSADTVRASPSIPLYNNLPPNYWENLLNGNIDEERYN 220
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi02g3854 220 Gene3D - 58 186 - -
Glsi02g3854 220 MobiDBLite consensus disorder prediction 1 26 - -
Glsi02g3854 220 SUPERFAMILY AF0104/ALDC/Ptd012-like 55 179 - -
Glsi02g3854 220 ProSiteProfiles PPC domain profile profile. 54 192 IPR005175 -
Glsi02g3854 220 MobiDBLite consensus disorder prediction 1 45 - -
Glsi02g3854 220 CDD DUF296 60 170 IPR005175 -
Glsi02g3854 220 Pfam Plants and Prokaryotes Conserved (PCC) domain 59 171 IPR005175 -
Glsi02g3854 220 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 19 183 IPR014476 GO:0003680
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi02g3854 Glsi-ChrGlsi02 84900486 84901148 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi02g3854 22 178 AT-hook Motif Nuclear Localized (AHL) Family AT3G04570 54.762 8.62e-39 134