Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi02g3833 ATGGAAGACAAGTATATGAAACCCACATATTCTTTTCAGAAGTCCATTGTCCGAGACCTGACTGTAAATACAGCCCCAATGCAGGCTGTTTCGTCAAATTCCAACAACAGAAATGGTGGACACATGTTTTCGTCAGTTTTGCAGCATGATAGGCAGTACCAAGATTCGCCCTTCATTTCTCATCCTCAAGAACGTGATGGCATTTCCTGGGGAACAGATCACTTTCAAAATCTTTTTAATTTTCCTGAAAATGTTTCCATCCAGAACGATCAGGTGGAAAATAACACGTGTTATATATCTGATGACAATACCAAAAAATCTGATCTCGGGGAGTGGGTGGAGCAGTTAATGTCTGTTAATGATCCTCTGCATCCAAATTGGAGTCAACTTCTAGGTGATGATAATGTAGAAGATTCAAAATCAATGGAGATTCAGGCTACCGAGCAGGAACATGTACCATCTGTAGAAGCTAATGCCATTGCTAATTCACAGTTGAATGCACTACAAACTAAGCCGAGAATGCGTTGGACTCCAGAACTTCACGAGGCTTTCATGGAAGCAGTCAATGGGCTTGGTGGTAGCGAGAAGGCTACTCCAAAGGGTGTCTTGAACCTAATGAAAGTTGAGGGCCTTACCATCTATCATGTGAAAAGCCACCTTCAGAAGTATAGAACTGCCAGATACAAACCTGAGTCATCAGAAGGAACTTCTGAGAAAAAGTTGACATCGATCAAAGAAATGAAATCTCAAGACTTGAAAATGAGTATGGGGATTACTGAAACATTGCGGTTGCAGATGGAATTCCAGAAGCAGCTACATGAACGACTGGAGATTCAAAGAAAGTTGCAGATTCAAATTGAAGAGCAGGGTAAGTGTCTTCTGATGATGTTTGAGAAACATAAAGACATGGAGGGTGGCAAGCTCGACACATCCTCCTCCTCTGCTCCGCTATCAAACACGGTGCTACCTGCCCCTCCGATTGACAATTTAGACACCTTAAATGAAGGCCATGAAAAATCTGAAATCTACAGTGTCATCGCAAACGAAGAACGTTCTCAAGATGACAACACCAAGAAAAAGGCTGATGAACAGGAGCTGGGGAATGATCGGTTTGGTGCACCAGCCGCCAAAAGGGTGAAGAGTGGATTGTAG 1152 0.428 MEDKYMKPTYSFQKSIVRDLTVNTAPMQAVSSNSNNRNGGHMFSSVLQHDRQYQDSPFISHPQERDGISWGTDHFQNLFNFPENVSIQNDQVENNTCYISDDNTKKSDLGEWVEQLMSVNDPLHPNWSQLLGDDNVEDSKSMEIQATEQEHVPSVEANAIANSQLNALQTKPRMRWTPELHEAFMEAVNGLGGSEKATPKGVLNLMKVEGLTIYHVKSHLQKYRTARYKPESSEGTSEKKLTSIKEMKSQDLKMSMGITETLRLQMEFQKQLHERLEIQRKLQIQIEEQGKCLLMMFEKHKDMEGGKLDTSSSSAPLSNTVLPAPPIDNLDTLNEGHEKSEIYSVIANEERSQDDNTKKKADEQELGNDRFGAPAAKRVKSGL 383
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi02g3833 383 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 149 341 IPR044848 GO:0003700
Glsi02g3833 383 MobiDBLite consensus disorder prediction 351 367 - -
Glsi02g3833 383 NCBIfam myb-like DNA-binding domain, SHAQKYF class 171 225 IPR006447 GO:0003677
Glsi02g3833 383 FunFam Myb family transcription factor 170 228 - -
Glsi02g3833 383 SUPERFAMILY Homeodomain-like 169 225 IPR009057 -
Glsi02g3833 383 MobiDBLite consensus disorder prediction 345 383 - -
Glsi02g3833 383 Gene3D - 170 229 - -
Glsi02g3833 383 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 168 228 IPR017930 -
Glsi02g3833 383 Pfam MYB-CC type transfactor, LHEQLE motif 256 301 IPR025756 -
Glsi02g3833 383 MobiDBLite consensus disorder prediction 304 325 - -
Glsi02g3833 383 Pfam Myb-like DNA-binding domain 173 224 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi02g3833 Glsi-ChrGlsi02 84783823 84786466 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi02g3833 21 325 G2-like Transcription Factor Family AT3G04450 45.652 3.61e-80 249
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Glsi02g3833 Myb_DNA-binding 4.2e-07 CL0123