Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Glsi02g3827 | ATGCATACCCACTTGCTGTTCTTCTATTTTTACATTGGCCTCTCTCTTGTTTTTGCTGAGGTAGCTCAAGGTGCAGCAAGTGATGAATTCTCAACTTTGCTCCTAGTCAAATCCAGTCTTACTGATCCAATGAAACATCTCAAGGACTGGCAAGCACCCAGCAATGTGACCCACAATGGTTCGCGCCATTGTAACTGGACTGGGGTTTGGTGCAACTCTAAAGGCTTCGTAGAGAGACTTGACCTCTCCAACATGAACCTTAGCGGTCGTGTCTCAGACCACATTCAAGCCCTTTCAAGTCTGTCTTCTCTTGACGTAAGTTGTAATAATTTTGCTTCGTCTTTGCCAAAATCACTTTCCAACCTCTCCTCCCTCAAGAGCTTTGATGTCAGCCAGAACTACTTCACTGGTAGCTTTCCAACCGGTCTTGGAAGAGCCGCAGGATTGAGATCAATTAACGCCTCAAGTAATGATTTTCTGGGTTTTCTTCCTGAGGATCTTGGAAATGCAACATTGCTCGAAAGCCTTGATTTTCGAGGGAGCTACTTCGAAGGTTCAATCCCGAGGAGTTTCAAGAATTTGCAGAAGCTCGCATTTCTTGGGCTTTCAGGCAATAATTTTACAGGCAAGATTCCAGGAGAGCTTGGAGAACTTGCTTCTCTAGAGACATTGATTCTCGGGTACAATGAGTTTGAAGGTGAGATCCCTGCAGAGTTTGGCAACCTTACCAACCTTCGGTACCTCGACTTGGCTGTAGGTAGTCTAAGTGCACAGATTCCACCAGAATTGGGTAGGATGAAAAAACTTACTACAATTTACTTGTACAAGAACAAATTCCAAGGGAAGATTCCCCCTGAAATTGGCAACATTTCGTCACTGGTATTTTTGGACCTGTCTGACAATCAGATTTCAGGGGAGCTTCCAGAGGAACTTGCTAATCTAAAGAACTTGCAGCTCTTGAATGTAATGAGCAATAAACTAACTGGTTTTGTGCCGGAGAAGCTTGGTGAATTGAAAAATTTACAGGTGCTTGAGCTATGGAAAAATTCTTTAAGAGGTCCTTTGCCAATAAACCTAGGACATAACTCTCCGTTGCAGTGGTTAGACGTGTCCTCTAACTCATTATCAGGTGAAATTCCTCCAGGTTTGTGTACTTTTGGCAATCTCACAAAACTAATGCTCTTCAATAATTCCTTCTCTGGTTCCATTCCAAGTGGACTTTCAAATTGTTTGTCTTTGGTACGTGTTCGCATTCAGAACAATCTCATATCTGGGACTATTCCGGCTGGCTTCGGAAACCTTCCGGGCCTTCAGCGGCTGGAATTGGCACAGAACAACCTCACTGGGGAAATTCCAATAGATATAACTGCATCTTCATCGCTTTCTTTCATTGATGTATCTTGGAACCACCTTGAATCATCTCTTCCTTCTGGAATTCTTTCTATTCCGACCCTTCAAATTTTCATTGCCTCCAACAACAGACTGGAAGGCAATACTCCAGATGAGTTCCAAGACTGTCCATCTCTCTCTGTGCTGGATCTTTCAAACAACCATATATCTGGCAAAATCCCAGAAAGCATCGCTTCTTGCCAGAAATTAGTCAATCTGAACCTTCGAAAAAACCAGTTAACCGGGGAAATCCCGAAATCAATCACAAACATGCCCACCTTAGCCATTCTTGATCTGTCCAATAATTCACTGACTGGTCGGATACCTGAAAACTTTGGCAGTTCCCCAGCTCTGGAAATGCTCAACCTGTCCTACAATAAGCTTCAGGGCCCAGTACCCTCAAATGGGATTCTGACTACCATAAATCCTAATGATCTTATTGGCAATGCCGGTCTCTGCGGGGACATTCTTCCTCCATGTTCTCAGAGTTTCACTTTGACAAGCCAGCGAAGGAGCTCACACATGAAGCACATCATTATTGGTTTTATCACTGGCATATCAGTGATATTATCTCTTGGCATTGCATATTTCGGTGGTAGATGGTTATATAAGAAATGGTACTTGTATAACGGTTTCATGCATGATTGGTTCAGAAGGAGCAATGAAGAGTGGCCCTGGAGGTTAGTGGCATTCCAAAGGGTAAGTTTCACTAGTAGTGAGATCCTAACCTGTGTAAAGGAATCAAATATCATAGGTATGGGTGGCACTGGTATTGTGTACAAAGCCGAAATTCATAGACCTCATGTAACGGTGGCAGTGAAGAAACTATGGAGGTCAGGAACAGACATAGAAGATGGCAATGAAGTGTTAAGAGAAGTGAACCTCCTAGGGAGACTGAGGCATAGGAATATTGTAAGGCTATTTGGGTATGTTCACAATGAAAGAGATGTGATGATGGTGTACGAGTACATGCCCAATGGGAATCTTGGGACAGCACTACAGGGTGAACAAGGTGGAAGGTTGCTGGTAGATTGGGTTTCAAGGTACAACATAGCTGTTGGAGTAGCACAAGGCCTGAATTACCTGCACCATGATTGTCACCCACCAGTTATTCACAGGGATATCAAGTCTAACAACATACTCCTTGATGCAAATTTGGAGGCAAGGATAGCAGACTTCGGGTTGGCAAGGATGATGATCCAAAAGAAAGAGACAGTTTCAATGGTGGCTGGATCTTATGGATATATCGCACCAGAATATGGATACACTCTAAAGGTGGACGAGAAAATTGACATATACAGTTTTGGTGTCGTACTTCTAGAGCTCCTAACTGGCAAAAAGCCTTTAGACCCATCATTTGAAGAATCTGTGGACATGGTTGAATGGATACGAAAGAAGAGGAGCAATAGAGGGTTGGAAGAAACACTAGACCCCACCATTGCCGGTAAGTGCAAACATGTCCAAGAAGAGATGCTTCTTGTACTCCGGATAGCTCTTCTTTGTACTGCAAAGCTTCCCAAGGAAAGGCCATCCATGAGGGACATAGTCACTATGCTTGGAGAGGCAAAACCCAGAAGGAAAAGCGTTTGTCATAACGTAGTACACGACGGTTGTAAGGAAAAGCCAATCTTTACTACCTCCCCCATAGTAAGACTTCTGTAG | 3051 | 0.4356 | MHTHLLFFYFYIGLSLVFAEVAQGAASDEFSTLLLVKSSLTDPMKHLKDWQAPSNVTHNGSRHCNWTGVWCNSKGFVERLDLSNMNLSGRVSDHIQALSSLSSLDVSCNNFASSLPKSLSNLSSLKSFDVSQNYFTGSFPTGLGRAAGLRSINASSNDFLGFLPEDLGNATLLESLDFRGSYFEGSIPRSFKNLQKLAFLGLSGNNFTGKIPGELGELASLETLILGYNEFEGEIPAEFGNLTNLRYLDLAVGSLSAQIPPELGRMKKLTTIYLYKNKFQGKIPPEIGNISSLVFLDLSDNQISGELPEELANLKNLQLLNVMSNKLTGFVPEKLGELKNLQVLELWKNSLRGPLPINLGHNSPLQWLDVSSNSLSGEIPPGLCTFGNLTKLMLFNNSFSGSIPSGLSNCLSLVRVRIQNNLISGTIPAGFGNLPGLQRLELAQNNLTGEIPIDITASSSLSFIDVSWNHLESSLPSGILSIPTLQIFIASNNRLEGNTPDEFQDCPSLSVLDLSNNHISGKIPESIASCQKLVNLNLRKNQLTGEIPKSITNMPTLAILDLSNNSLTGRIPENFGSSPALEMLNLSYNKLQGPVPSNGILTTINPNDLIGNAGLCGDILPPCSQSFTLTSQRRSSHMKHIIIGFITGISVILSLGIAYFGGRWLYKKWYLYNGFMHDWFRRSNEEWPWRLVAFQRVSFTSSEILTCVKESNIIGMGGTGIVYKAEIHRPHVTVAVKKLWRSGTDIEDGNEVLREVNLLGRLRHRNIVRLFGYVHNERDVMMVYEYMPNGNLGTALQGEQGGRLLVDWVSRYNIAVGVAQGLNYLHHDCHPPVIHRDIKSNNILLDANLEARIADFGLARMMIQKKETVSMVAGSYGYIAPEYGYTLKVDEKIDIYSFGVVLLELLTGKKPLDPSFEESVDMVEWIRKKRSNRGLEETLDPTIAGKCKHVQEEMLLVLRIALLCTAKLPKERPSMRDIVTMLGEAKPRRKSVCHNVVHDGCKEKPIFTTSPIVRLL | 1016 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Glsi02g3827 | 1016 | PRINTS | Leucine-rich repeat signature | 509 | 522 | - | - | |
Glsi02g3827 | 1016 | PRINTS | Leucine-rich repeat signature | 554 | 567 | - | - | |
Glsi02g3827 | 1016 | ProSiteProfiles | Protein kinase domain profile. | 708 | 997 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Glsi02g3827 | 1016 | Gene3D | Ribonuclease Inhibitor | 220 | 380 | IPR032675 | - | |
Glsi02g3827 | 1016 | SMART | LRR_typ_2 | 242 | 266 | IPR003591 | - | |
Glsi02g3827 | 1016 | SMART | LRR_typ_2 | 434 | 458 | IPR003591 | - | |
Glsi02g3827 | 1016 | SMART | LRR_typ_2 | 386 | 410 | IPR003591 | - | |
Glsi02g3827 | 1016 | SMART | LRR_typ_2 | 554 | 578 | IPR003591 | - | |
Glsi02g3827 | 1016 | SMART | LRR_typ_2 | 506 | 530 | IPR003591 | - | |
Glsi02g3827 | 1016 | SMART | LRR_typ_2 | 290 | 314 | IPR003591 | - | |
Glsi02g3827 | 1016 | SMART | LRR_typ_2 | 338 | 362 | IPR003591 | - | |
Glsi02g3827 | 1016 | SMART | LRR_typ_2 | 218 | 241 | IPR003591 | - | |
Glsi02g3827 | 1016 | SMART | LRR_typ_2 | 98 | 122 | IPR003591 | - | |
Glsi02g3827 | 1016 | Pfam | Leucine rich repeat | 532 | 591 | IPR001611 | GO:0005515 | |
Glsi02g3827 | 1016 | Pfam | Leucine rich repeat | 100 | 159 | IPR001611 | GO:0005515 | |
Glsi02g3827 | 1016 | Pfam | Leucine rich repeat | 413 | 471 | IPR001611 | GO:0005515 | |
Glsi02g3827 | 1016 | FunFam | Leucine-rich repeat receptor-like protein kinase PXL1 | 365 | 627 | - | - | |
Glsi02g3827 | 1016 | FunFam | MDIS1-interacting receptor like kinase 1 | 708 | 790 | - | - | |
Glsi02g3827 | 1016 | SUPERFAMILY | L domain-like | 61 | 309 | - | - | |
Glsi02g3827 | 1016 | ProSiteProfiles | Leucine-rich repeat profile. | 292 | 315 | IPR001611 | GO:0005515 | |
Glsi02g3827 | 1016 | FunFam | Leucine-rich repeat receptor-like protein kinase PXL1 | 26 | 181 | - | - | |
Glsi02g3827 | 1016 | ProSiteProfiles | Leucine-rich repeat profile. | 508 | 530 | IPR001611 | GO:0005515 | |
Glsi02g3827 | 1016 | Pfam | Leucine Rich Repeat | 509 | 530 | IPR001611 | GO:0005515 | |
Glsi02g3827 | 1016 | Gene3D | Transferase(Phosphotransferase) domain 1 | 791 | 1002 | - | - | |
Glsi02g3827 | 1016 | ProSitePatterns | Protein kinases ATP-binding region signature. | 714 | 738 | IPR017441 | GO:0005524 | |
Glsi02g3827 | 1016 | SUPERFAMILY | Protein kinase-like (PK-like) | 703 | 982 | IPR011009 | - | |
Glsi02g3827 | 1016 | SUPERFAMILY | RNI-like | 258 | 600 | - | - | |
Glsi02g3827 | 1016 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 833 | 845 | IPR008271 | GO:0004672|GO:0006468 | |
Glsi02g3827 | 1016 | FunFam | MDIS1-interacting receptor like kinase 1 | 791 | 1000 | - | - | |
Glsi02g3827 | 1016 | Gene3D | Phosphorylase Kinase; domain 1 | 708 | 790 | - | - | |
Glsi02g3827 | 1016 | SMART | serkin_6 | 708 | 982 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Glsi02g3827 | 1016 | Pfam | Protein kinase domain | 710 | 979 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Glsi02g3827 | 1016 | PANTHER | LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED | 379 | 982 | - | - | |
Glsi02g3827 | 1016 | FunFam | Leucine-rich repeat receptor-like protein kinase PXL1 | 182 | 282 | - | - | |
Glsi02g3827 | 1016 | Pfam | Leucine rich repeat N-terminal domain | 27 | 72 | IPR013210 | - | |
Glsi02g3827 | 1016 | Gene3D | Ribonuclease Inhibitor | 381 | 624 | IPR032675 | - | |
Glsi02g3827 | 1016 | Gene3D | Ribonuclease Inhibitor | 28 | 147 | IPR032675 | - | |
Glsi02g3827 | 1016 | Gene3D | Ribonuclease Inhibitor | 148 | 219 | IPR032675 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Glsi02g3827 | Glsi-ChrGlsi02 | 84557025 | 84560186 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Glsi02g3827 | 4 | 1016 | Receptor kinase-like Gene Family | AT1G08590 | 64.016 | 0.0 | 1310 |