Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi02g3819 ATGATTCTAAATCTCCATCTTCAGGGGACTTCAGTGAATATCATTGTATGCTCTCGTGTATGGATTGAAGATCCAGAGGCAGCTTGGATTGATGGACAGACTTATACTGGCAATATTCTTATTGCGATAAATCCATTCCAAAAACTAGCTCATATTTATGATGCTCACATGATGCAACAATACAAGGGCGCACCATTTGGAGATTTAAGCCCTCATGTATTTGCAGTTGCTGATGCTGCATATAGGGCGATGATTAATGAAGGAAAAATCAATTCAATTCTGGTCAGTGGGGAAAGTGGAGCTGGTAAAACTGAAACTACAAAGATGCTTATTCAAATCCAGTTCTTGAAGCATTGGGCAATGCAAAAACTGAAGCAATTTCAGGGTTGTCGCCGCAATTCTTCATCTTGGTGTGATGCTGATGGCTTGGAAGTTGCATGGTGTAAGCGTGTCATGGTGACCCCTGAAGAAGTTATAAAGCAGAGCCTTGATCCCCAAAGTGCGGCATTTCAGCATATGATTCTCTGCAGTTTTGAGCAGTTCTGCATTAATTGTACAAACGGGAAGTTGCAGCAACATTTCAATCAGGCAAAGTCTCAGACCGCATTAAGCATTTCAGATGTTTTAGACCTTATTGAAGATGTTTTCTCCCTCTTTCACTTTGTTCATGAGATTGTGACTGCGTAG 687 0.4105 MILNLHLQGTSVNIIVCSRVWIEDPEAAWIDGQTYTGNILIAINPFQKLAHIYDAHMMQQYKGAPFGDLSPHVFAVADAAYRAMINEGKINSILVSGESGAGKTETTKMLIQIQFLKHWAMQKLKQFQGCRRNSSSWCDADGLEVAWCKRVMVTPEEVIKQSLDPQSAAFQHMILCSFEQFCINCTNGKLQQHFNQAKSQTALSISDVLDLIEDVFSLFHFVHEIVTA 228
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi02g3819 228 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 34 214 IPR027417 -
Glsi02g3819 228 Gene3D Kinesin motor domain 31 137 IPR036961 -
Glsi02g3819 228 Pfam Myosin head (motor domain) 34 112 IPR001609 GO:0003774|GO:0005524|GO:0016459
Glsi02g3819 228 PANTHER MYOSIN 176 197 - -
Glsi02g3819 228 Gene3D - 176 218 - -
Glsi02g3819 228 SMART MYSc_2a 28 227 IPR001609 GO:0003774|GO:0005524|GO:0016459
Glsi02g3819 228 PRINTS Myosin heavy chain signature 90 115 IPR001609 GO:0003774|GO:0005524|GO:0016459
Glsi02g3819 228 PRINTS Myosin heavy chain signature 33 52 IPR001609 GO:0003774|GO:0005524|GO:0016459
Glsi02g3819 228 ProSiteProfiles Myosin motor domain profile. 1 228 IPR001609 GO:0003774|GO:0005524|GO:0016459
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi02g3819 Glsi-ChrGlsi02 84494105 84497160 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi02g3819 138 213 Myosins gene family AT1G54560 39.259 6.36e-16 74.7